Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 347 2e-90 seq1 179 7e-40 seq4 116 7e-21 >seq2 Length=4144821 Score = 347 bits (384), Expect = 2e-90 Identities = 956/1449 (66%), Gaps = 31/1449 (2%) Strand=Plus/Plus Query 221406 CGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT 221465 |||| ||| || ||||| ||||||||||||||||| || ||| || |||||| ||| Sbjct 3047606 CGCACGACGCAGTGAGGGCGGCGTGGTAGATGGTCTCGAAAATCTTCAGGTTGAG-CTCA 3047664 Query 221466 TG-GCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGT 221524 | ||||||||||| ||||||||| || || | ||| ||||| || ||||| Sbjct 3047665 CGAGCCTCGGGAGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTATCGGCGAGGCCCTGG 3047724 Query 221525 ACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAA 221584 || || | ||||| ||| | ||| | | ||||||| | ||| || ||||| || Sbjct 3047725 ACACCAAGACCGACGGGGCGGTGACGCATGTTGGAGTTGCGCGCCTCAATGACGGGGTAG 3047784 Query 221585 AAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGC 221644 ||||| | ||| | | || ||||||| ||||| ||| | | ||| || | Sbjct 3047785 TAGTTGCGGGTGATGACCTGGTCGAGGTTCTTAGTGACGACCCTGGTGATGTCGTGCAAC 3047844 Query 221645 TTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGG 221704 |||||| | | | | | || || || || ||||| || ||| Sbjct 3047845 TTCTGGAAGTCGTAGGTCTGC------CCCTCAAGG------TCAACAAAGGCCGGGAGG 3047892 Query 221705 GCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764 |||| ||||||||| ||||| || ||||| || | |||| |||||||| Sbjct 3047893 GCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATGATCTCG 3047952 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGA-TTGGC 221823 || ||||||||| |||||||||| || ||||| | || || ||||| ||| ||||| Sbjct 3047953 GTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTT-CGAGTTGGC 3048011 Query 221824 AGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883 ||||||||||||||||| ||||||||||||||||| ||| ||| |||| || | Sbjct 3048012 CGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATGGCGAA 3048071 Query 221884 CCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGG 221942 |||||| | |||| || | | |||| | | | ||||| || | | | || Sbjct 3048072 CCAGAGCT-TCTGCGCCTTGATCGTCTTGCGGCCCTTGCCCTCACGCTCATACTTCTCG- 3048129 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 |||||| || |||| || || | | ||| | ||||| || ||| || || | Sbjct 3048130 --TAGAGCTGCTCGAACTCCTCCGAGTGCACATCGGCAAGGCCGGGGCACTCAGCAGGGC 3048187 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||| || |||||| || | | ||| | || ||||||||||||||||||||| | Sbjct 3048188 ACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATCCAGA 3048247 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | ||||| || | | ||| ||||||| ||||| ||| || | || || | Sbjct 3048248 GAGCGTAGAAGAGGTCACGAGCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAA 3048307 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 || ||||| | ||| |||||||||||||| || |||| ||| | |||||||| |||| Sbjct 3048308 GGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGGCGCT 3048367 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||||||| || || | | |||| | || || || | || || | Sbjct 3048368 TGTTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAGGGACAA 3048427 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 ||||| || |||||||| || |||||||| ||| ||| | | ||| ||| Sbjct 3048428 TACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCTTGGCGCGAATGTT-GTGG 3048486 Query 222303 CAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | | || ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct 3048487 ATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAGAGTGTCG 3048546 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||| || || ||||| ||||| | | | || || || ||||||||||| | Sbjct 3048547 TAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTGCGCG 3048606 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | || | || |||||| || || ||||| ||||| || ||||||| | ||||| Sbjct 3048607 TGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTCGGACATG 3048666 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTC 222541 || | ||| ||||| | ||| | | | | ||| || |||||||| | || | | Sbjct 3048667 AGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGCAACGCGC 3048726 Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATT 222599 ||| ||||| ||| || | ||| | |||| | | | || || |||||||| Sbjct 3048727 ATGAGCATGTGCTGCGGGCGCTCGGC--GACCTTGCCGTCGATGCGAAGGAGGTACGAGC 3048784 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 || || |||||||| || ||| ||||| ||||| | | ||| | | |||| Sbjct 3048785 GCTCAAGCGTCTTGAAGCCGAAGAAGTTGTACGAGAAGTCGCGGTCGTAGATTATTGCGG 3048844 Query 222660 CGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAG 222719 ||| |||| ||||||||| | ||| || | | || || || | ||| | Sbjct 3048845 AGTCAAGCTTGTCCTTGTGCTTCATCGTCACGTCATACACCTCCTGCGAGACCATGGGCG 3048904 Query 222720 CGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGA--A 222777 | || | ||| | |||||| || || |||||| | || | | |||| | Sbjct 3048905 ACTGCTTTCCGGTCTTGGGGTTGACCCAGTTGTACAGGTCGGTGATAACCTGCGAGAAGA 3048964 Query 222778 CGTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATA 222837 | | || | |||| |||||||||||| |||||||| | || | ||| | || |||| Sbjct 3048965 CCT-TCTTG-GTCTCCTTGTGCAGATTGGACACGGCCAGACGGGCCGCGAGAATGGCATA 3049022 Query 222838 GTCAGGGTG 222846 ||| | ||| Sbjct 3049023 GTCGGCGTG 3049031 >seq1 Length=5253760 Score = 179 bits (198), Expect = 7e-40 Identities = 542/836 (65%), Gaps = 24/836 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||||||||| ||||| | || Sbjct 4412231 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 4412290 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || ||| | ||| |||| || |||| | | | |||||| | || || Sbjct 4412291 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAGCGCTACTTCATCG 4412348 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || ||||| | || ||||| || || || || || || || |||||||| || |||| Sbjct 4412349 AGCACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAGC 4412408 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | || || ||| || ||||||||| |||||||| |||||||| | Sbjct 4412409 GCTTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGA 4412468 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||||||| || | ||||| || || ||||| |||| Sbjct 4412469 TGGAGAACATCCACTCTGAGACCTACTCT---CTTCTCATCGACACCTACATCCGTGACG 4412525 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||| | | || || ||||| ||| ||| ||| ||||||||| ||||| Sbjct 4412526 GTGCCCGCCGCAACTACCTCTTCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGG 4412585 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || |||||| | | ||| | |||| | |||||| || | | Sbjct 4412586 CCGACTGGGCGCTGCGCTGGATCTCGGACGACAGCTCGTCGTTCGCCGAGCGCCTCATCG 4412645 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 | || ||||| || ||||||||||| ||| || ||||| || | ||||||||||||| Sbjct 4412646 CGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCA 4412705 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || |||||||| || ||| || |||||||| || | ||||||| Sbjct 4412706 AGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGG 4412765 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 | ||||||| || || || ||||| |||| ||| |||| | | || | || | | Sbjct 4412766 GCCTCCACACCGACTTCGCATGCCTCCTCTTCAC---CCACCTCCGCCGC-CGCCCCCAC 4412821 Query 26069 AAGAGACCGTCT--ACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126 | |||| | | | | |||||| ||||| || ||||||||| ||||||| | Sbjct 4412822 CCG-GACCTTATTGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGTTCCTCAC 4412880 Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186 | ||||||||| || |||||| |||| ||||| || Sbjct 4412881 CGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGA 4412940 Query 26187 GTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244 || || ||||||| ||||| || ||| || || | ||| ||| | || | Sbjct 4412941 GTTCGTCGCCGACCGCCTGCTCGTCGCC--CTCGGCAACCCCAAGATCTGGAACTCGACC 4412998 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 ||||| |||||||| ||||| | || ||| | | || ||| |||||||||| || Sbjct 4412999 AACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 4413054 >seq4 Length=2250194 Score = 116 bits (128), Expect = 7e-21 Identities = 168/234 (72%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || |||||| ||||||||||||||| ||| || || ||||| || |||||||||||| Sbjct 1041584 GCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATTTGCAGCAATCTTCTGGCTC 1041525 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || ||| |||| ||| ||| ||| ||||||||||||| | || ||| Sbjct 1041524 AAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCTCGCGTGATGAG 1041465 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| || ||||| || ||||||||| | || | || || | ||| Sbjct 1041464 GGCATGCACACCGACTTTGCATGTCTGCTCTACCAGTACCTCAAGCACCGC---TGTTCG 1041408 Query 26068 CA-AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 || | ||| || || ||||| ||| |||||||| |||||||||||||| || Sbjct 1041407 CAGACAGA-GGTGCACCGTATCGTCAGTGAGGCTGTCGAGATCGAGAAGGAATT 1041355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844614231040