Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 105 8e-18 seq1 100 3e-16 seq4 89.7 6e-13 >seq3 Length=2509747 Score = 105 bits (116), Expect = 8e-18 Identities = 276/416 (66%), Gaps = 19/416 (5%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||||||||||||||| || ||| ||||| |||| || ||||| || ||||| || Sbjct 132903 TGGTGCCAAGATCCCCCGTGGTGCCATTCTCTCGGGACCTCCTGGTACCGGTAAGACTCT 132962 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAA 175393 ||| ||| |||| ||| ||||| | || || || ||| || | || ||| | | Sbjct 132963 CCTTGCCAAGGCCACCGCTGGTGAGGCTAAGGTGCCCTTCTTCTCCGT-CTCGGGTTCCG 133021 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | ||||| |||||||| || ||||| ||| || | || || || |||| ||| Sbjct 133022 AGTTTGTCGAGATGTTCGTCGGTGTCGGTCCCTCGCGTGTGCGTGACCTCT------TCG 133075 Query 175454 CCC--GCGAAAATCAA----CCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCA 175507 ||| || || | || ||| |||||||||||||| ||||| || || | |||| Sbjct 133076 CCCAGGCCAAGAAGAACGCCCCAGCCATTGTCTTCATTGACGAGATCGACGCTATTGGCA 133135 Query 175508 AGCAACGCAGCGCTGGTGG----TATGCCAGCAAATGACGAGAGAGAACAAACAATTAAT 175563 || || || || || | || | || || |||||| | || || | || Sbjct 133136 AGGCCCGTGGCAAGGGCGGCCACTTTGGCGGC-AACGACGAGCGTGAGTCGACCCTCAAC 133194 Query 175564 CAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCC 175623 || || || |||||||| ||||| | || || |||||| || |||| | Sbjct 133195 CAGCTCCTTGTGGAGATGGACGGCTTCGGCACCAAGGAGCACATTGTTGTGCTTGCCGGT 133254 Query 175624 ACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || || |||| || ||||||| |||||| | || || || |||||||| || Sbjct 133255 ACCAACCGCGCCGACGTCCTTGACCCCGCCCTGATGCGTCCCGGCCGTTTTGACCG 133310 >seq1 Length=5253760 Score = 100 bits (110), Expect = 3e-16 Identities = 116/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 |||| || |||||||||||||| | ||||| || || ||||| ||||||||||| | Sbjct 4412620 CTCG-TCGTTCGCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGG 4412678 Query 65123 GGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 | || ||| | | || | ||| | |||||||| || || ||||| || || ||||| Sbjct 4412679 GCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCT 4412738 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || |||||||| || || ||||| |||||| Sbjct 4412739 CGAACGAGCTTATTTCGCGCGACGAGGGCCTCCAC 4412773 >seq4 Length=2250194 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 65079 GCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTA 65137 |||||| | || ||||| ||||||||||| ||||||||||| |||||||| ||| || | Sbjct 1041594 GCGCCTCATCGCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATT-TGCAGCAA 1041536 Query 65138 TTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTT 65197 | | ||| | |||||||| || || |||| ||||| |||| || || || || | Sbjct 1041535 TCTTCTGGCTCAAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCT 1041476 Query 65198 CCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | || |||||||| | ||| || ||||| Sbjct 1041475 CGCGTGATGAGGGCATGCACACCGACTTTGC 1041445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569480686080