Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 141 3e-28 seq6 134 4e-26 seq3 93.3 1e-13 >seq1 Length=5253760 Score = 141 bits (156), Expect = 3e-28 Identities = 402/615 (65%), Gaps = 2/615 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || || ||||| | | || |||||||| | ||||| || || | Sbjct 4906425 CCCGAGGAGATCTCCTCCATGGTCCTCATCAAGATGAAGGAGACCGCTGAGGCTTACCTT 4906366 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || || | | ||||| | || || || ||||| || || || | |||||| Sbjct 4906365 GGTGGCACCGTCTCCAAGGCTGTCGTCACCGTCCCCGCCTACTTCAACGACTCGCAGCGT 4906306 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || || || || | ||| || || | | || || | || || || || Sbjct 4906305 CAGGCCACCAAGGACGCCGGTACCATCGCTGGTCTCGAGGTCCTCCGTATCATCAACGAG 4906246 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || || || || || || | | ||| || || || | Sbjct 4906245 CCCACCGCCGCCGCTATCGCTTACGGCCTCGACAAGAAGTCTGAGGGCGAGAAGAACGTC 4906186 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || || | ||||||||||| || || || || || || || |||| ||||| Sbjct 4906185 CTCATCTTCGACCTTGGTGGTGGTACCTTCGACGTGTCGCTCCTGACCATTGAGGAGGGC 4906126 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || ||||| || || || ||||| ||||| || || |||||||| || || ||||| || Sbjct 4906125 ATCTTTGAGGTCAAGGCTACTGCCGGTGACACCCACCTTGGTGGTGAGGACTTTGACAAC 4906066 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGA 349950 |||||||| || ||||| | || || ||||| |||| || | || || Sbjct 4906065 CGTCTCGTCAACCACTTTGTCCAGGAGTTCAAGCG-CAAGAACAAGAAGGACATCACCTC 4906007 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || | | || | ||||| || | || || || || ||||||||||| | | || Sbjct 4906006 GAACGCCCGTGCTCTCCGTCGTCTCCGCACCGCTTGCGAGCGTGCTAAGCGCACTCTCTC 4905947 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | | || ||||| || || || || || || || |||| || |||| | Sbjct 4905946 GTCGGCCGCTCAGACCTCGATCGAGATCGACTCGCTCTACGACGGCATTGACTTCTACAC 4905887 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || || || |||||||| || || || | || ||| || || | | || ||||| Sbjct 4905886 CTCGATCACCCGTGCTCGCTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCGACCATGGA 4905827 Query 350131 TCCTGTGGAAAAAGT 350145 || ||||| || || Sbjct 4905826 GCCCGTGGAGAAGGT 4905812 >seq6 Length=960230 Score = 134 bits (148), Expect = 4e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| || || || |||||||| || ||||| || || || || | || ||||| || Sbjct 925527 AGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCC 925586 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || || ||||||||||| ||||| ||||| ||||| ||||| || || || ||| Sbjct 925587 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCC 925646 Query 140646 TGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704 || || || ||| || || || || |||| || || | || || ||||| || | || Sbjct 925647 TGGATCTT-GCTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGT 925705 Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || || || || || |||||||| Sbjct 925706 CTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 925738 >seq3 Length=2509747 Score = 93.3 bits (102), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | ||||| || || || || ||||| || || || || || || Sbjct 987503 CATACCGCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 987444 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || ||||| ||||| || || ||||| || || Sbjct 987443 CGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGG 987384 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || || | || || | || Sbjct 987383 GGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTC 987324 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || ||||||||||| Sbjct 987323 GACCTCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 987273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254089372848