Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 187 6e-42 seq6 156 1e-32 seq7 141 2e-28 >seq3 Length=2509747 Score = 187 bits (206), Expect = 6e-42 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||| || || ||||| || |||||||| || |||| |||||| Sbjct 987493 CGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 987434 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| |||||||| ||||| || ||||| || || | || Sbjct 987433 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCC 987374 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||||||||| ||| || ||||||||| Sbjct 987373 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGA 987314 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| |||||||| ||||| || || | |||||| Sbjct 987313 GTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 987273 >seq6 Length=960230 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| ||||||||||| || || ||||| || || | || || Sbjct 925745 ACGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGT 925804 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| ||||||||||| || || ||||| ||||| | || Sbjct 925805 GCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCC 925864 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || ||||| ||||| ||||| ||| || ||||| || Sbjct 925865 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAG 925924 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 ||||| ||||| || ||||| Sbjct 925925 GGTGATGGTCTTGCCGGTGAG 925945 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || || ||||| || || | || || | || || Sbjct 925527 AGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCC 925586 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || |||||||| |||| || ||||||||| Sbjct 925587 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCC 925646 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || ||||| || ||||||||| Sbjct 925647 TGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTC 925706 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 925707 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 925738 Score = 140 bits (154), Expect = 8e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | || ||||| || || ||||| || |||| || || | || || Sbjct 925249 AGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGCCCGTCC 925308 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| |||||||| || ||||| ||||| | || ||||||||| Sbjct 925309 TCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 925368 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||||||| || |||||||| || || ||| Sbjct 925369 TGGATCTTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGACCTCGAGCGTAATGGTC 925428 Query 211083 TTTCCCGTGAGA 211094 || || || ||| Sbjct 925429 TTGCCAGTCAGA 925440 >seq7 Length=796062 Score = 141 bits (156), Expect = 2e-28 Identities = 137/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| |||||| | || || || ||||||||||| |||||||| || || || ||| Sbjct 392370 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 392311 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || || | || ||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct 392310 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAG 392251 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| ||||| ||||| |||||||| || || | |||||| Sbjct 392250 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 392195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151762373840