Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 seq4 107 2e-18 seq12 98.7 8e-16 seq14 89.7 4e-13 seq15 82.4 6e-11 >seq3 Length=1542526 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| ||||| || ||||||| ||||| |||||| Sbjct 329052 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCC 329111 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| ||| | ||| |||||||| |||||| ||| Sbjct 329112 GCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTC 329171 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| |||| || |||||||||||||| | || Sbjct 329172 ACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTC 329231 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 329232 TTGACGAAGATCTGCAT 329248 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | ||| |||||||| || ||||| ||||||| Sbjct 329250 CCGCCGCGCAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 329309 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 329310 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 329369 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | ||| Sbjct 329370 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCGACC 329429 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || ||||| || || ||||| Sbjct 329430 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 329476 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| || || | ||||||| ||||| ||||| Sbjct 328824 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTCCGTCCGTCCTCGAGCTGCTTGCCG 328883 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| ||| | || |||||||| ||||| ||| Sbjct 328884 GCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTC 328943 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| |||| || ||||||||||| || | ||| Sbjct 328944 ACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCCGTGAGGGTT 329003 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 329004 TTGACGAAGATCTGCAT 329020 >seq4 Length=1343180 Score = 107 bits (118), Expect = 2e-18 Identities = 213/307 (69%), Gaps = 14/307 (5%) Strand=Plus/Minus Query 23644 CCAGAATTGCCCGTGGTCTTGCTGAGCGGGTG--CTCGCCGAGGCCCAGGTCATCGCGGT 23701 |||| | |||||| ||||| ||| | || | |||||||||| ||||| || | Sbjct 558431 CCAGCGTGGCCCGTCGTCTTC--GAGTCGTTGAACCCGCCGAGGCCGAGGTCGTCTTCG- 558375 Query 23702 CCGT-GTGCACGACCAGGCTGCGGCCCAATATACTCAACGGCCCAAACAGGGTTATCACG 23760 |||| |||||| |||| || |||||| | || | ||||| | || || || ||| Sbjct 558374 CCGTCGTGCACAACCACGCCGCGGCCGAGAATCGTGCGGCGCCCACAGAGCGTGATGACG 558315 Query 23761 TTGTCGCTCATGTGTATGGCCGTGAGTGCGGTGCA-GCCCGCAGAGCGCACGTTGCCCAG 23819 ||||| | |||| ||| || || || || | |||||| | | |||||| || Sbjct 558314 CTGTCGGTGATGTCGATGTGCGCGAC-GCCGTCCTCGCCCGCCTCG---ATGTTGCCGAG 558259 Query 23820 GTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGTGGGGTTAAA 23879 |||||||||||| || || | || |||||| |||| | || | |||||| | Sbjct 558258 GTCGCCGACGTGGCGGACCCTCTCCTCTGGCGCGGCGTGCGTGCGGTTGAAGGGGTTGTA 558199 Query 23880 GTGCTCGCCAGCGGACGTGCAGCCGT---TGCTGGTGTCGCCGAATTCGTGCACGTGAAA 23936 |||| |||||| |||| |||||||| || | |||||||||| |||||||||| || Sbjct 558198 GTGCCCGCCAGTCGACGCGCAGCCGTCCGTGAAGATGTCGCCGAACGCGTGCACGTGGAA 558139 Query 23937 ACCGTGC 23943 |||||| Sbjct 558138 GCCGTGC 558132 >seq12 Length=718499 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| ||||| || ||||||| ||||| ||||| Sbjct 398519 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 398578 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | ||| |||||||| |||||| || Sbjct 398579 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 398638 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | ||| ||||||||||| || | || Sbjct 398639 ACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 398698 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 398699 TTGACGAAGATCTGCAT 398715 >seq14 Length=702256 Score = 89.7 bits (98), Expect = 4e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870 |||||| |||||||||| ||| || | | | || ||||||||||| ||| | Sbjct 534116 GTTGCCGAGGTCGCCGATGTGCCGGTTCTTGTCGCTCGGCGCGCCGTGGTCGTGGTTGAA 534175 Query 23871 GGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 23930 |||||| ||||| |||| | |||| ||||||||| ||| ||||||||| ||||| || Sbjct 534176 GGGGTTGTAGTGCGCGCCGGTGGACATGCAGCCGTCACTGAGGTCGCCGAACTCGTGGAC 534235 Query 23931 GTGAAAACCGTG 23942 ||| || ||||| Sbjct 534236 GTGGAAGCCGTG 534247 >seq15 Length=682537 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 23809 ACGTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGG 23868 |||||||| |||||||||||||| ||||| | | || ||| ||||||| ||| || | Sbjct 651654 ACGTTGCCGAGGTCGCCGACGTGGCGCTCAGAGTCGGTGGGGCCGCCGTGGTTCTTGCCG 651595 Query 23869 GTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGC 23928 |||||| ||||| |||| || || |||||||| | ||||||||| | ||| Sbjct 651594 TGGGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCCGACGAGAGGTCGCCGAACTGGTGG 651535 Query 23929 ACGTGAAAACCGTGC 23943 | ||| || ||| || Sbjct 651534 ATGTGGAAGCCGCGC 651520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258695664168