Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 140 3e-28 seq12 129 5e-25 seq11 127 2e-24 >seq3 Length=1542526 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||| ||||| Sbjct 329273 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTG 329332 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| ||||||| |||||||| |||||||| |||||||||||||| || || Sbjct 329333 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 329392 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| ||||||||||| ||| | || |||||||| Sbjct 329393 CGACTTGACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 329452 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 |||||| || || || ||||||||| Sbjct 329453 CAGAGTCTTGACGAAGATCTGCATG 329477 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||||||||| || || |||||||| || | ||| || ||||||||||| Sbjct 328817 GTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTCCGTCCGTCCTCGAGCTG 328876 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || |||||||||||||||| ||||| || || ||||||||||| ||| || Sbjct 328877 CTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTT 328936 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | | ||||||||| | || | || ||||| || Sbjct 328937 GCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCCGT 328996 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || |||||||| Sbjct 328997 GAGGGTTTTGACGAAGATCTGCAT 329020 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| ||||||||| || || |||||||| ||||||| || || ||||| Sbjct 328542 CACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGACCGTCCTC 328601 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| || |||||||| || ||||| |||||||||||||| Sbjct 328602 GAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 328661 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| || | || || Sbjct 328662 GATCTTCGACTTGACGTTGTCGATCGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTT 328721 Query 118709 GCCGGTCAGA 118718 ||| || ||| Sbjct 328722 GCCAGTGAGA 328731 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| | | | || | ||| | || ||||| || || |||||||| || Sbjct 329020 TACCTCCGCGGAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCG 329079 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||||| ||||| || || || ||||||| |||||||| ||||| | Sbjct 329080 AGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGGG 329139 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | |||| ||||| | | ||||| Sbjct 329140 GGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGA 329199 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || |||||||| || || || || || |||||||| Sbjct 329200 CCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 329248 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || || |||| || |||||||| |||||||| |||||||||||| Sbjct 329617 TCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTG 329676 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||| || || || | || | |||||||| | ||||||||||| ||| | Sbjct 329677 TCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 329736 Query 118704 GTTTTGCCGGTCAG 118717 || |||||||| || Sbjct 329737 GTCTTGCCGGTGAG 329750 >seq12 Length=718499 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 398512 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 398571 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||||||||||||||| ||||| || |||||||||||||| || || Sbjct 398572 CTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 398631 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| | ||||||||||| ||| | || ||||| || Sbjct 398632 GGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 398691 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 398692 GAGGGTCTTGACGAAGATCTGCAT 398715 >seq11 Length=744446 Score = 127 bits (140), Expect = 2e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || |||||| |||||||||||||||| ||||| || |||||||||||| Sbjct 649284 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 649343 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| ||||||| | ||||||||||| ||| | Sbjct 649344 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATG 649403 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||||||| || || || |||||||| Sbjct 649404 GTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829881843816