Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq20 275 1e-68 seq5 107 4e-18 seq10 87.8 4e-12 >seq20 Length=453684 Score = 275 bits (304), Expect = 1e-68 Identities = 624/926 (67%), Gaps = 28/926 (3%) Strand=Plus/Minus Query 248817 GTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAA 248876 |||| | ||||| | ||||| ||||| ||| | || |||||| || || ||||| Sbjct 231165 GTACAACTTCTTCGGCTTCAAGACGCTCGAGCGCGCATACCTCCTCCGCATCGAGGGCAA 231106 Query 248877 GATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGA 248936 | | | || || ||||||||| ||||||| || || ||||| || ||| || | Sbjct 231105 GGTTGCCGAGCGCCCGCAGCACATGCTGATGCGTGTTGCCGTCGGTATCCACGGCGAGAA 231046 Query 248937 CATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCAC 248996 | | || |||| ||||||| |||| | ||| ||| |||| | || || || | Sbjct 231045 CCTTGACCGCGTCATCGAGACTTACAACCTCATGTCTGAGCGCTACTTCACCCACGCGTC 230986 Query 248997 ACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 ||||| ||||||||||||||||| | || ||| || |||||||| ||| | || Sbjct 230985 GCCGACCCTCTTCAACGCCGGTACGCCCCACGCGCAGATGTCGTCGTGCTTCCTTGTCGC 230926 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTT 249115 |||| | |||||||| |||||||||| || |||||||| || || | || |||| | Sbjct 230925 CATGAAGGACGACTCGATCGACGGCATCTACGACACGCTCAAGACCTGC-GCCCAGATCT 230867 Query 249116 CTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACA 249175 | || || || || ||||| || | || ||||||||| || ||||| ||||||| Sbjct 230866 CCAAGACTGCTGGTGGCATCGGCCTTCACATCCACAACATCCGCGCCAAGGGCTCGTACA 230807 Query 249176 TCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCA 249235 | || || || || | | |||||||| ||| | || || || || | | Sbjct 230806 TTGCCGGCACCAACGGCTACTCGAACGGTATCGTCCCCATGCTCCGCGCCTACGACGCAA 230747 Query 249236 CCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATT 249289 | ||| | | | || |||||| ||| ||||| || |||||||||| || Sbjct 230746 CTGCCCGCTACGTCGACCAGGGCGGCAACAAGCGCC---CTGGTGCGTTCGCCATCTACC 230690 Query 249290 TGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACG 249349 | || ||||||||||| | || || ||||| ||| | |||||| ||||||| | Sbjct 230689 TCGAGCCATGGCACGCCGACGTCTTCGACTTCCTCGACCTCCGCAAGAACCACGGCAAGG 230630 Query 249350 AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCC 249409 || ||| | || || ||||||||||||| ||| ||| || | ||| | |||||| | Sbjct 230629 AGGAGATGCGCGCCCGCGACCTCTTCTACGCCCTCTGGATCCCGGACCTCTTCATGAAGC 230570 Query 249410 GCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATC 249468 | ||| || | |||||||| ||||| || | | || |||| ||||||| |||| | Sbjct 230569 GTGTCGAGTCGGACGGCGACTGGACCCTCATGTGCCCCGCCGAGTGCCCCGG-CCTCGCC 230511 Query 249469 GA--TCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATCG 249526 || || || ||| | || || || || ||| |||| ||||| | | |||| | Sbjct 230510 GACGTCCACTCGGAG--GAGTTTGAGCAGCTCTACGAGAAGTACGAGCGCGAGGGCAAGG 230453 Query 249527 ---GCAAGACAATCAAGGCTCGGACCCT---TTTTGCGAAGGTGGTGGAGTCCCAGATAG 249580 ||||||| |||||||| | || || || || | | | ||| |||||| | Sbjct 230452 GTCGCAAGACCATCAAGGCCCAGAAGCTCTGGTTCGCCA---TCCTCGAGGCCCAGACCG 230396 Query 249581 AGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGG 249639 |||| || || || | | || | | || |||||| |||| ||||| ||||| | | Sbjct 230395 AGACTGGCGGCCCCT-TCATGCTCTATAAGGACGCGGCCAACTCCAAGTCGAACCAGCAG 230337 Query 249640 CATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAG 249699 || || || |||||| ||||| || ||||| | ||| | || | |||||||| Sbjct 230336 CACCTCGGCACCATCAAGTCGTCCAACCTCTGCACTGAGATCATCGAGTACTCGTCGCCC 230277 Query 249700 GAGGAGATTGCCGTCTGCAACCTGGC 249725 || ||| ||||||| |||||||| || Sbjct 230276 GACGAGGTTGCCGTGTGCAACCTTGC 230251 >seq5 Length=1196292 Score = 107 bits (118), Expect = 4e-18 Identities = 176/254 (69%), Gaps = 25/254 (10%) Strand=Plus/Minus Query 254099 GCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGAT 254158 ||||||||||||||| ||||| || ||||| ||||| | |||||| ||||| ||||| Sbjct 831631 GCGCGTGCTCGAGCTCAACGCGTCCGACGAGCGCGGCATCAGCGTCGTGCGCGAGAAGAT 831572 Query 254159 CAAGACTTTCTCCA---AGATGTCG----ATTTCGTCGT----TC------------CAA 254195 |||||| ||| || ||| | | || | | ||| || | | Sbjct 831571 CAAGACCTTCGCCCGCGAGACGCCACGCAATGTTGGCGTGTCCTCGGACGGCAAGGTCTA 831512 Query 254196 CCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGAC 254255 |||| | || || | ||||||| | ||||| |||||||| ||| | |||||| ||| Sbjct 831511 CCCGTCG--CCACCGTACAAGCTCATCATCCTCGACGAGGCCGACTCGATGACGCAGGAC 831454 Query 254256 GCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTG 254315 || ||| |||||||||||| | ||||||||| | || | ||||| || ||||| Sbjct 831453 GCACAGAGCGCCCTCCGCCGCATCATGGAGACGTATTCGCGCATCACGCGCTTCTGCCTC 831394 Query 254316 GTGTGCAACTACGT 254329 || ||||||||||| Sbjct 831393 GTCTGCAACTACGT 831380 >seq10 Length=751894 Score = 87.8 bits (96), Expect = 4e-12 Identities = 99/129 (77%), Gaps = 8/129 (6%) Strand=Plus/Plus Query 157276 CTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTGG- 157334 ||| |||||||||| ||| ||||| || || | |||||||| ||||| ||||||| Sbjct 102702 CTCGAAAAAGTTGGCCTTGCCCTGCAGGCTGATGAGCTCCATCCAGTCGAACGGGTTGGT 102761 Query 157335 CGCAGTTGTACACCTTGTCGTACCCCAGC---TGGTTCAGCCAGTAGTCCGCCACAAACT 157391 ||| || ||||| ||| |||||||||||| | |||||| |||||||||||||| Sbjct 102762 CGC-GTGGTACATCTTCTCGTACCCCAGCGCGACGATCAGCC---GGTCCGCCACAAACT 102817 Query 157392 TGATGTACT 157400 ||||||| Sbjct 102818 CCATGTACT 102826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765051752064