Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 107 4e-18 >seq3 Length=1542526 Score = 107 bits (118), Expect = 4e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | |||||| || ||||| || || ||||| || ||||| | ||||| Sbjct 328809 AGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTCCGTCCGTCC 328868 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || ||||| || || | ||| || || || || || || || || ||| Sbjct 328869 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 328928 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||| ||||| || || || || | || ||| | || ||||| || || || || Sbjct 328929 TGAATC-TTGCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGT 328987 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| || || |||||||| Sbjct 328988 CTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396954275384