Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq31 140 3e-28 >seq31 Length=194661 Score = 140 bits (154), Expect = 3e-28 Identities = 276/396 (70%), Gaps = 18/396 (5%) Strand=Plus/Minus Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561 |||||||||||||||| ||||| || || | ||| | || ||| | | |||| Sbjct 50520 CGCCCGTGGACCCGAACCCGCCGGCCCCGCGCAGCGTCGCCTCGAGGTCCTCGACCTG-- 50463 Query 5562 CCACATCGGGGAAC---GCAGCGCGCTCGCAGA-TCAGCTGCGCTATTCGGTCGCCCGTC 5617 || || ||| | ||| ||||||| |||| | |||||||| | ||||||||| | Sbjct 50462 CCGCACCGGCGCCATGTGCA-CGCGCTC-CAGAATAAGCTGCGCGACGCGGTCGCCCTTG 50405 Query 5618 TTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAG 5677 |||| ||| || | | ||| ||||||| |||| || || | |||||||||| Sbjct 50404 GCGACCTTGAAGTCCTCGCCGCCATAGTTGAAGAGCAGGACCTTGACCTCGCCGCGGTAG 50345 Query 5678 TCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGG 5737 |||||||| | ||||||||||| ||||||||| ||||||| |||||| || |||||| Sbjct 50344 TCGGCGTCGACGACGCCCGCGCCGACGTCGATGCTGTGCTTGCTCGCCAGTCCCGAGCGG 50285 Query 5738 GGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGC-AGGTCCGTGAACACCAC 5796 || || | ||||| || |||| |||| | | | | | || ||| | ||| | | || Sbjct 50284 GGGGCGATACGGCCATAAGTCCCAGCGGGGA-CAGCAACGGCGAGGCCTGTGGAGA-CAA 50227 Query 5797 TCGCC-GACCGCCCGCAGGGAC---GATGCAGTCGCAAGCGCTGCAGAGGTCGTACCCGG 5852 |||| |||| ||||||||| ||||| ||| | || | | ||||||| |||| Sbjct 50226 GCGCCTTGCCGCGCGCAGGGACGGTGATGCCGTCCGAGGC---GTACAGGTCGTGGCCGG 50170 Query 5853 CCGCCCGCGGGGACCCCCTGGTGGGGAGCGTGGCGT 5888 ||| | | || || | || |||||||| |||| Sbjct 50169 CCGAGAGGGCCGAGCCGCGCGTCGGGAGCGTCGCGT 50134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053886353776