Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq10 132 8e-27 seq4 118 2e-22 seq9 86.0 1e-12 >seq10 Length=751894 Score = 132 bits (146), Expect = 8e-27 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| || ||||| ||||| || || ||||| || ||||||||| |||| Sbjct 490128 GGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGCCGTGGCGGTGTCAAGCGTATCTCG 490069 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || | |||| || |||| ||| | || | |||||||||||| ||| ||| |||| Sbjct 490068 GGCCTCATCTACGAGGAGACTCGCGGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCGC 490009 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 || | || ||| ||||||||||| || || ||||| |||||||| | || ||||| Sbjct 490008 GACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACCTCGCTCGACGTCGTC 489949 Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || || | || || || ||||| | | || ||||| || Sbjct 489948 TACGCCCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCGG 489908 >seq4 Length=1343180 Score = 118 bits (130), Expect = 2e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| || ||||| ||||| || || ||||| || || |||||| |||| Sbjct 1254692 GGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGCCGTGGCGGTGTGAAGCGTATCTCG 1254633 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || | |||| || |||| || | || | |||||||||||| ||| ||| |||| Sbjct 1254632 GGCCTCATCTACGAGGAGACGCGCGGCGTACTCAAGATCTTCCTCGAGAACGTCATCCGC 1254573 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 || | || ||| ||||||||||| || || ||||| |||||||| | || |||| Sbjct 1254572 GACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTCGTG 1254513 Query 16652 TATGCATTGAAACGTCAAGGCCG 16674 || || | || || || ||||| Sbjct 1254512 TACGCCCTCAAGCGCCAGGGCCG 1254490 >seq9 Length=763370 Score = 86.0 bits (94), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||| ||||| |||||||| || || || ||||||||||| ||||||||| |||| Sbjct 12501 GGCATCACGAAGCCTGCTATCCGCCGCCTTGCGCGTCGTGGTGGCGTCAAGCGTATCTCG 12442 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||| || |||| |||| || | ||||||||| Sbjct 12441 GGCTTAATCTACGAGGAGACGCGTGGCGTGCTCAAGATCTTC 12400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075110397914