Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 122 1e-22 >seq3 Length=1542526 Score = 122 bits (134), Expect = 1e-22 Identities = 179/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||| || |||||||| | || || ||||| || |||||||| Sbjct 118740 CAGGCAAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGG 118681 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||| ||||| || ||||| || ||||| || || || || || |||||| Sbjct 118680 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAG 118621 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT--GT- 33480 || || || || || || ||||| || || | ||| || | | |||||| | || Sbjct 118620 ATGCCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGGCAAACGACGAGCTGTCGTCCGTG 118561 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | ||||| ||||||||||| || | || || || || || || || || Sbjct 118560 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTTG 118501 Query 33541 AAGAGATAGTT 33551 ||||| ||||| Sbjct 118500 AAGAGGTAGTT 118490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946436889680