Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=1542526 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||| | Sbjct 329022 CCTCCGCGGAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 329081 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||||||| | || || ||||| ||||| || Sbjct 329082 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGGGGG 329141 Query 16829 ACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | |||||| |||| | | | ||||| |||||| | | | | |||||| || ||| Sbjct 329142 ATGCCCTCCTTGTCCTGGATCTTGCT-CTTCACGTTGTCGATCGTGTCGGAGGACTCGAC 329200 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || ||||| || || ||||| || |||||||| Sbjct 329201 CTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 329248 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || || |||||||| || ||||||||||| | Sbjct 328794 CCACCACGCAGACGCAGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAG 328853 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | || ||||| ||| | || || ||||| ||||| || Sbjct 328854 AGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 328913 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||| ||||| ||| ||||| |||||| | | | | |||||| || ||| Sbjct 328914 ATACCCTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATCGTGTCGGAGGACTCGAC 328972 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || || || || |||||||| || |||||||| Sbjct 328973 CTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| | | ||| | ||||||| | || Sbjct 329274 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGC 329333 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 329334 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 329393 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | ||| || | ||||||||| || |||||| Sbjct 329394 GACTTGACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 329453 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 329454 AGAGTCTTGACGAAGATCTGCAT 329476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087516173020