Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq12 91.5 1e-13 seq11 82.4 6e-11 >seq3 Length=1542526 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || || |||| || || || || || || Sbjct 329020 ATGCAGATCTTCGTCAAAACCCTCACGGGCAAGACCATCACGCTGGAGGTCGAGTCCTCC 328961 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||||||||| ||||| || Sbjct 328960 GACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 328901 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | ||||| || || |||| || |||||| Sbjct 328900 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGACGGACTCTCTCGGACTACAAC 328841 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | ||| |||| |||| || ||| Sbjct 328840 ATCCAGAAGGAGTCTACACTCCACCTCGTTCTGCGTCTGCGTGGTGGT 328793 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || || || Sbjct 329248 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTGGAGGTCGAGTCCTCC 329189 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || ||||| || Sbjct 329188 GACACGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 329129 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | ||||| ||||||| |||| || |||||| Sbjct 329128 CAGCGCCTCATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCGGACTACAAC 329069 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | || | || | || | ||||||||| Sbjct 329068 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGCCTCCGCGGAGGT 329021 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || || || || | | Sbjct 329476 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCG 329417 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || || ||||| || Sbjct 329416 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 329357 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| ||||||| |||| || |||||| Sbjct 329356 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCGGACTACAAC 329297 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || | || ||||||| ||| Sbjct 329296 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGTCTGCGCGGCGGT 329249 >seq12 Length=718499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || || || | || || || || |||| || || || || || Sbjct 398717 AGATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCT 398658 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| | |||| || || || ||||||||||| || || ||||| | Sbjct 398657 CGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 398598 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || || ||||| ||| | ||||| ||||||| | || || |||| Sbjct 398597 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 398538 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || || ||| Sbjct 398537 ACATCCAGAAGGAGTCGACC 398518 >seq11 Length=744446 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || || ||| | || || || || |||| || || || || || Sbjct 649440 AGATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCT 649381 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| | |||| || || || ||||||||||| || || ||||| | Sbjct 649380 CGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 649321 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || || ||||| ||| | ||||| ||||||| | || || |||| Sbjct 649320 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 649261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727498687370