Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 154 3e-32 seq1 131 3e-25 seq20 120 6e-22 seq3 102 2e-16 seq10 84.2 4e-11 >seq2 Length=1608611 Score = 154 bits (170), Expect = 3e-32 Identities = 368/551 (67%), Gaps = 4/551 (1%) Strand=Plus/Plus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAG 218565 |||||| || | ||||| || |||||||||| || || |||||| | || Sbjct 498149 ATCCCCATCTCCGACTTTGTCAACAAGGAGCTTATCCTCTTCTCGATGGCCGACAACATA 498208 Query 218566 CGTTCTATTCCCAGC-GTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 ||||| || |||| | || | ||| ||||||||||| ||||| ||| || | |||| Sbjct 498209 CGTTCGAT-CCCATCAGTCGCGGACGGCCTCAAGCCCGGTCAGCGCAAGGTCATGTTTGG 498267 Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684 |||||||| |||||| | || || ||||| || ||| | |||||||| | Sbjct 498268 TTGCTTCAAGCGCAACCTGAAGAAGGAGATCAAGGTTGCCCAGCTCGGAGGTTATGTCGC 498327 Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGC 218744 ||| | || | ||||| ||||| |||||||||||| || ||||||| ||| | || Sbjct 498328 CGAGAACTCGGCGTACCACCACGGCGAGCAGAGTCTGACGGCAACCATTGTCGGCCTCGC 498387 Query 218745 ACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTC 218804 ||| | | ||| ||||| |||||||| ||| | || |||||||| ||||| ||| | Sbjct 498388 GCAGAATTTTGTCGGCAGCAACAACATCAACCTCCTCGAGCCCAACGGCCAGTTCGGTAC 498447 Query 218805 TCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCC 218864 || | |||||| || || || || | || |||||||| || || | Sbjct 498448 GCGCATGCAGGGTGGCAAAGACGCGGCGAGCGCTCGTTACATCTTTACCAACACTTCTGC 498507 Query 218865 CGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGA 218924 ||||||| ||||| | | ||||| || |||||| || ||||||| || || Sbjct 498508 GATGACGCGAGCCGTGTTTCACCCCGCCGACGACCCGCTCCTCAACTATCTTGTCGAGGA 498567 Query 218925 TGGTTCTTCG-ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATG 218983 || | || || |||||||||| || |||| || |||| | | ||| | || | Sbjct 498568 CGG-CCAGCGCATCGAGCCCGAGTACTACCTGCCCACTGTTCCCCTGATCCTCATCAACG 498626 Query 218984 GTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACA 219043 | || | |||||||| ||||| | || || | || || |||||| ||| ||| Sbjct 498627 GCGCGGACGGTATCGGCACAGGCTGGAGCACCCAGATCCCCAATTACAACCCCGTCGACG 498686 Query 219044 TCATTGACAAC 219054 | | |||||| Sbjct 498687 TTGTCGACAAC 498697 >seq1 Length=1665426 Score = 131 bits (144), Expect = 3e-25 Identities = 189/266 (71%), Gaps = 3/266 (1%) Strand=Plus/Minus Query 279693 CCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTA 279752 || || | ||| || |||||||| |||||||||||||| | ||| | | ||||| || Sbjct 336314 CCCGTCGCTTCGCTTTCGGGTGGCTGGAAGATGAAGCTCGAGCTCGCCAGAGCCATGCTC 336255 Query 279753 CTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTA 279812 | | ||||| |||| || || |||||||| ||||||||| | |||| | | ||| Sbjct 336254 ATTGGCGCCGACATCCTCCTCCTCGATGAGCCGACCAACCACCTCGACATCCAGACCGTC 336195 Query 279813 GCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 || ||||| | | ||||| | ||| || | | || | | |||||| ||||| ||| Sbjct 336194 GCGTGGCTGGAGGAGTACCTCAACAGCCTCTCGGAGGTCACGTGCCTCATCGTCTCGCAC 336135 Query 279873 GACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAG 279932 |||||||||||||| || ||||||| | | ||||| ||||| ||| | || |||| Sbjct 336134 GACTCTGGCTTCCTCGACAACGTGTGCACGGATATCATGCACTACGAGAAGAA---GAAG 336078 Query 279933 CTCTCCAAGCACATCGGCAACCTGTC 279958 | || | || ||||||||||| Sbjct 336077 ATTGCCTACTACCCTGGCAACCTGTC 336052 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 |||||||| || || || ||||| || ||||| || || ||||| | || || || ||| Sbjct 335837 GGTGTCATCGGCCCTAACGGTGCCGGCAAGTCGACGCTTATCAAGCTTCTCACCGGTGAG 335778 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 || | | ||||| ||| ||||| ||| | |||| | | |||||||| Sbjct 335777 ACTGTCCCTAACGAGGGCAGCGTGCACAAGCACCCCGCCCTGCGTGTCGGCTACGTCGCG 335718 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| |||||||||||| | | ||||| || | |||| || ||| ||||| ||| Sbjct 335717 CAGCACGCGTTCCACCACATCAACCAGCACCTCGAGAAGACTGCTGTCCAGTACATCCAG 335658 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 335657 TGGCGTTA 335650 >seq20 Length=453684 Score = 120 bits (132), Expect = 6e-22 Identities = 136/182 (75%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| |||| ||||| ||||| |||| |||| || || |||||| || || Sbjct 373122 GGTCCCAACGGTTCGGGCAAGTCGACCCTCGTCAAGCTCCTTACCGGTGAGACCGAGCCC 373063 Query 280239 AC---TGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | || || |||| |||||||| |||||| | || | |||||||| |||||| Sbjct 373062 AACCTTGGCGGCACCGTCTGGAAGCACCCCAACCTTGTCATCGGCTACGTCGCCCAGCAC 373003 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| ||||||| |||| |||||| | | ||||| | |||||| Sbjct 373002 GCCTTCCACCACATCGACCACCACCTCGACAAGACTCCCCTCGAGTACATGCTCTGGCGC 372943 Query 280356 TA 280357 || Sbjct 372942 TA 372941 Score = 95.1 bits (104), Expect = 2e-14 Identities = 107/142 (75%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 280708 CTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGT 280767 |||| || |||||||| || || |||||||||||||| | ||| |||| || || | Sbjct 372574 CTCG-ATGCGCGGTCTCTCGGGTGGCCAGAAGGTCAAGGTCGTCCTCGGTGCCGCCACCT 372516 Query 280768 GGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCC 280827 ||| | ||| ||| | ||| |||||||||||| |||||||| || ||||||||| | Sbjct 372515 GGCGCCGCCCCCACATCATCTGTCTCGACGAGCCCACCAACTACCTCGACCGCGAGTCGC 372456 Query 280828 TGGGCGCTCTGAGTGCTGCTCT 280849 | | |||||| | ||||| || Sbjct 372455 TCGCCGCTCTCACCGCTGCCCT 372434 >seq3 Length=1542526 Score = 102 bits (112), Expect = 2e-16 Identities = 377/583 (65%), Gaps = 11/583 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| || ||||| | |||||| |||||||||||||| || Sbjct 119007 TCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAAGGGGTTGGTC 118948 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | || | |||||| | ||| || || || | || ||||| || |||||||| | Sbjct 118947 GAGTTCCAGATCTTGGGGTTGCCGAGGGCGACTAGGAGACGGTCGGCGACAAACTCGATG 118888 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||| | ||| || | | ||||||||| || | ||| || | || || || Sbjct 118887 TACTGGCACATGAGCTTGGCGTTCATGCCGATGAGGGAGAC-GGGGAGGGCGTCGGTGAG 118829 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTG-TGCCAGAGAC 251799 ||| |||| ||| | | || ||||| | || |||| | || | | | | Sbjct 118828 GAACTCCTGCTCGATCTCGACGGCCTCGCGGATGAT---CTTCTCGATGAGGTCGGGGTG 118772 Query 251800 AGCTTGTTCTC-CAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | | || | | | | ||||| | |||| | ||| || |||||||| Sbjct 118771 GGGGCGGCGGCGGAGGTGCGTGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGGCCCTCGTC 118712 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||||| |||||| || | ||||| ||||| | || || ||| ||||||| Sbjct 118711 GCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCA 118652 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 |||||| | | ||| || || ||||| | | |||||||| | | || | || Sbjct 118651 GAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAAGGCGATGAG 118592 Query 251979 GCGCTCAGCAAACGAC---TTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT 252035 |||||| ||||||||| |||| | || | | | ||||| | |||||||| Sbjct 118591 GCGCTCGGCAAACGACGAGCTGTCGTCCGTGATCCAGCGGAGGGCCCAGTCGGCCTTCTT 118532 Query 252036 TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTC 252095 | |||||| || ||||| || | ||||| |||| || ||| |||| Sbjct 118531 CTTGATGCAGGGGATGGTCTCGATCGCCTTGAAGAGGTAGTTGCGGCGGGCGCCGTCACG 118472 Query 252096 GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 |||| || || | ||||| |||||| ||||||| |||||| Sbjct 118471 GATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATG 118429 >seq10 Length=751894 Score = 84.2 bits (92), Expect = 4e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| ||||||||||| ||||||| ||||||| | |||||| |||| | || Sbjct 103023 GTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTGCTGAAGGTCAGGCCGCGCATGAGGCC 103082 Query 251904 ACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACA 251963 || ||| ||||||||||||| || ||||| || ||||| | | ||||| ||||| Sbjct 103083 GCGCTTCTTGAGCCAGAAGATGGCCGCGAAGGACCCTGAGAAGAAGATGCCCTCCACACA 103142 Query 251964 CACCCATGCAACAAGGCGCTCAGC-AAACGACTTGTCCTGCGACAAGAACTTCTGTGCCC 252022 | | | || | ||||| | || |||| | |||| ||| | | |||| | |||| Sbjct 103143 CGCAAAGGCGATGAGGCG-TGTGCGGAACGGCATGTCGGGCGTGATGTACTTGAGCGCCC 103201 Query 252023 ATGCTGCCTTCTTTC 252037 | | |||||||||| Sbjct 103202 AGTCCGCCTTCTTTC 103216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835509422418