Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 seq11 86.0 5e-12 seq12 82.4 6e-11 >seq3 Length=1542526 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || ||| | || | ||||| || || || |||||||| || Sbjct 328791 ATACCACCACGCAGACGCAGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCC 328850 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || || || || || || || ||||||||||||| ||||| || Sbjct 328851 GAGAGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGG 328910 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| || | | || | ||||||| ||| ||| Sbjct 328911 GGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAGGACTCG 328970 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| || || ||||| || || |||||||| Sbjct 328971 ACCTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || ||||| || || |||||| ||||||| ||||| ||||| ||||| ||||| || ||| Sbjct 329322 TCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTG 329381 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || | | || | |||||| | || ||||| || | ||| | Sbjct 329382 TCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATG 329441 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||||||||||||| || || || ||||||||| Sbjct 329442 GTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 329477 >seq11 Length=744446 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || || || || || |||||| ||||||||||||| ||||| || || ||||| || ||| Sbjct 649284 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 649343 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || | | || | ||||| | ||| ||||| || | ||| | Sbjct 649344 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATG 649403 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| |||||||| || || || |||||||| Sbjct 649404 GTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 >seq12 Length=718499 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | || | || || || || || |||||||| || Sbjct 398486 ATACCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCC 398545 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || |||||| ||||||||||||| ||||| || Sbjct 398546 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGG 398605 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | ||| ||| Sbjct 398606 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCG 398665 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || || || || || |||||||| Sbjct 398666 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 398715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133898201976