Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6 105 6e-18 >seq6 Length=1023195 Score = 105 bits (116), Expect = 6e-18 Identities = 168/237 (71%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 20520 CGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCC 20579 ||||| ||||| | ||||||||||||| ||||||||| ||||| || || |||| ||||| Sbjct 849157 CGTCC-CGTACTCGGCCCCAAAGTGCCGCCACTGGAACCCGTACACGGGCCCCAGATCCC 849099 Query 20580 CCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCC 20639 | || | | ||| | |||||| | | | |||||||| | || || || ||||| Sbjct 849098 CTTCGCGGCGGTGTCCTAGGCCGACGCGGTCGAGGAACTCGCGCGACCCGTTGCCGTCCC 849039 Query 20640 ATATCTTGACTCC-TGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAA 20698 | || | || || | || || || | | || |||||| | ||| | ||||| Sbjct 849038 AGATATGCACGCCGCGGTCCTG-GAGGACGCGGGCGTCAGTGCAGCCCGCGACGAACCAG 848980 Query 20699 AGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAG 20755 || ||||| | ||| ||||| ||||| || || ||||| ||||| || | ||| ||| Sbjct 848979 AGGAGCTCCTCCACGACGCCGCGCCAGAAGACGCGCTTGGTGGTGAGGAGGGGGAAG 848923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372259318320