Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3 131 4e-25 seq12 113 1e-19 seq11 105 2e-17 seq2 91.5 3e-13 >seq3 Length=1542526 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | || || || ||||| || ||||| | | Sbjct 329250 CCGCCGCGCAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 329309 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 329310 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 329369 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | || ||| || || Sbjct 329370 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCGACC 329429 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 329430 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 329476 Score = 129 bits (142), Expect = 1e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | ||| ||||| |||| || || || ||||| || ||||| | | Sbjct 329022 CCTCCGCGGAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 329081 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || ||| Sbjct 329082 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGGGGG 329141 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| || ||| |||||||| || || | ||| || || || Sbjct 329142 ATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGAC 329200 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 329201 CTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 329248 Score = 96.9 bits (106), Expect = 8e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| ||||| || ||||| || | || || || |||||| Sbjct 328561 TCCTTCTGGATGTTGTAGTCGCTCAGCGTACGACCGTCCTCGAGCTGCTTGCCCGCGAAG 328620 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | ||||| || || || |||||||| |||| || ||||| Sbjct 328621 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 328680 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || | ||| ||| || || ||||| ||||| ||||| || || ||| Sbjct 328681 TCGATCGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGA 328731 >seq12 Length=718499 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || ||||| | Sbjct 398489 CCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 398548 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || ||| Sbjct 398549 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGG 398608 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | || || || || Sbjct 398609 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 398668 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 398669 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 398715 >seq11 Length=744446 Score = 105 bits (116), Expect = 2e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA 288357 ||||| | || ||||| ||||| || | || || || |||||||| |||||||| || Sbjct 649263 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 649322 Query 288358 GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 ||||| || || || |||||||| || | || ||||| || || | || Sbjct 649323 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAG 649382 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||||||||||||||| |||||||| Sbjct 649383 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 >seq2 Length=1608611 Score = 91.5 bits (100), Expect = 3e-13 Identities = 221/332 (67%), Gaps = 2/332 (1%) Strand=Plus/Minus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 || || || || ||||| || || |||||||||| | || |||||||||||| | Sbjct 498489 ATGTAACGAGCGCTCGCCGCGTCTTTGCCACCCTGCATGCGCGTACCGAACTGGCCGTTG 498430 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTC 325441 ||| | ||||||||| ||||| |||||| ||| ||| || ||| || ||||| Sbjct 498429 GGCTCGAGGAGGTTGATGTTGTTGCTGCCGACAAAATTCTGCGCGAGGCCGACAATGGTT 498370 Query 325442 CCTTGCAGA-GATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAA 325500 | |||| ||| ||||| ||||| || || | ||| || || ||||| | || Sbjct 498369 GCCGTCAGACTCTGC-TCGCCGTGGTGGTACGCCGAGTTCTCGGCGACATAACCTCCGAG 498311 Query 325501 CTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCG 325560 ||| |||||||| | || || ||| ||||||||||| | | || || || || Sbjct 498310 CTGGGCAACCTTGATCTCCTTCTTCAGGTTGCGCTTGAAGCAACCAAACATGACCTTGCG 498251 Query 325561 TTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGA 325620 ||| || |||| || || |||| || || || ||| ||| | ||| Sbjct 498250 CTGACCGGGCTTGAGGCCGTCCGCGACTGATGGGATCGAACGTATGTTGTCGGCCATCGA 498191 Query 325621 GAACAAAATAAGTTCCTTGTCGATGAAGTCGG 325652 ||| | ||||| ||||||| || ||||||| Sbjct 498190 GAAGAGGATAAGCTCCTTGTTGACAAAGTCGG 498159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652918796444