Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 3e-14 >seq2 Length=1608611 Score = 95.1 bits (104), Expect = 3e-14 Identities = 227/341 (67%), Gaps = 2/341 (1%) Strand=Plus/Minus Query 297434 TTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAAC 297493 || || || || || || || ||||| || || |||||||||| | || ||||||| Sbjct 498498 TTGGTAAAGATGTAACGAGCGCTCGCCGCGTCTTTGCCACCCTGCATGCGCGTACCGAAC 498439 Query 297494 TGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTC 297553 ||||| | ||| | ||||||||| ||||| |||||| ||| ||| || ||| Sbjct 498438 TGGCCGTTGGGCTCGAGGAGGTTGATGTTGTTGCTGCCGACAAAATTCTGCGCGAGGCCG 498379 Query 297554 ACGATGGTCCCTTGCAGA-GATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTA 297612 || ||||| | |||| ||| ||||| ||||| || || | ||| || || || Sbjct 498378 ACAATGGTTGCCGTCAGACTCTGC-TCGCCGTGGTGGTACGCCGAGTTCTCGGCGACATA 498320 Query 297613 ACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATAT 297672 ||| | || ||| |||||||| | || || ||| ||||||||||| | | || Sbjct 498319 ACCTCCGAGCTGGGCAACCTTGATCTCCTTCTTCAGGTTGCGCTTGAAGCAACCAAACAT 498260 Query 297673 CACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATC 297732 || || || ||| || |||| || || |||| || || || ||| || Sbjct 498259 GACCTTGCGCTGACCGGGCTTGAGGCCGTCCGCGACTGATGGGATCGAACGTATGTTGTC 498200 Query 297733 GTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGG 297773 | | |||||| | ||||| ||||||| || ||||||| Sbjct 498199 GGCCATCGAGAAGAGGATAAGCTCCTTGTTGACAAAGTCGG 498159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878615196300