Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq12 91.5 1e-13 seq11 82.4 8e-11 >seq3 Length=1542526 Score = 134 bits (148), Expect = 1e-26 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||||| | ||| || || || | ||||| || || || |||||||| || | Sbjct 329249 ACCGCCGCGCAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 329308 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| |||||||||||||| || | ||||| ||||||||||||||||| Sbjct 329309 GAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGG 329368 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || || || || || || || || ||| ||| || | || | ||| || || Sbjct 329369 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGT--CCGACGACTCG 329426 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | |||||||||||||| ||| || ||||| || ||||| Sbjct 329427 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 329476 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || |||| ||||| || || || |||||||| || | Sbjct 329021 ACCTCCGCGGAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 329080 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| |||||||||||||| ||| | ||||| |||||||||||||| || Sbjct 329081 GAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGGGG 329140 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || || || || Sbjct 329141 GATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGAC 329200 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || ||||| || ||||| Sbjct 329201 CTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 329248 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | || || || || || |||||||| || | Sbjct 328793 ACCACCACGCAGACGCAGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGA 328852 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || |||| || ||||||||||||||| | ||||| |||||||||||||| || Sbjct 328853 GAGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGG 328912 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || || || || Sbjct 328913 AATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGAC 328972 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | ||||| ||||| || ||||| Sbjct 328973 CTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 >seq12 Length=718499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | ||||| || || || |||||||| || | | |||||| |||| Sbjct 398503 AAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 398562 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | ||||| |||||||||||||| || || || || || || Sbjct 398563 CTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 398622 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || || || || || | || | ||| Sbjct 398623 CTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGT 398682 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || ||||| || ||||| Sbjct 398683 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 398715 >seq11 Length=744446 Score = 82.4 bits (90), Expect = 8e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 64266 TGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCT 64325 |||| || | | |||||| |||| || ||||||||||| || | ||||| ||||||| Sbjct 649261 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 649320 Query 64326 GGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC 64385 ||||||| || || || || || || || || || ||| || || | || || Sbjct 649321 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCG 649380 Query 64386 CGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || || | || | ||||||||| |||| ||| || ||||| || ||||| Sbjct 649381 AGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644187935120