Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 163 3e-35 seq11 113 4e-20 seq12 107 2e-18 seq4 87.8 2e-12 >seq3 Length=1542526 Score = 163 bits (180), Expect = 3e-35 Identities = 305/447 (68%), Gaps = 21/447 (5%) Strand=Plus/Plus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 ||||| || | ||||| |||||| |||||||||| |||||||||||||| ||||| Sbjct 118583 GCCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCC 118642 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTA 47252 | || || | | || | || | ||||||||||||||||| |||||||| Sbjct 118643 TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTC 118702 Query 47253 ATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACA-ACACTAGAGT 47311 |||||| | ||||| ||||| |||||| |||||||||| ||| || || ||| | Sbjct 118703 ATCTCGCGCGACGAGGGCCTCCACACCGACTTTGCCTGCCTCCTCTTCACGCACCTCCGC 118762 Query 47312 CGATCAAAAGTTGGACGTGCCCAC-----CGTCAGCGACATGTT--TGC-CGAAGCCGTC 47363 | | || ||||| | ||| ||| | | | | | ||| |||||| Sbjct 118763 C------------GCCGCCCCCACCCCGACCTCATCGAGAAGATCATCCGCGAGGCCGTC 118810 Query 47364 GCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCG 47423 | || ||| |||||| || |||| || || |||| || | | || |||||||| Sbjct 118811 GAGATCGAGCAGGAGTTCCTCACCGACGCCCTCCCCGTCTCCCTCATCGGCATGAACGCC 118870 Query 47424 GAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTAT 47483 || | ||| | |||||||||| |||||||||||||| || || || || | Sbjct 118871 AAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTCCTAGTCGCCCTCGGCAAC 118930 Query 47484 CCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGC 47543 |||||||| | || | || || ||||| |||||| | | || |||||| ||||| Sbjct 118931 CCCAAGATCTGGAACTCGACCAACCCCTTCGACTTTATGGAGATGATCTCGCTCCAGGGC 118990 Query 47544 AAGACCAACTTTTTCGAGAAGCGCGTC 47570 ||| ||||||| |||||| ||||||| Sbjct 118991 AAGGCCAACTTCTTCGAGTCGCGCGTC 119017 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || ||| Sbjct 329280 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 329339 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| ||||||||||||||| ||| ||| |||| Sbjct 329340 GCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 329399 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||||| |||||| |||| ||| | || |||||||||||||| Sbjct 329400 ACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTC 329459 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 329460 TTGACGAAGATCTGCATG 329477 Score = 107 bits (118), Expect = 2e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | |||||||| || || || ||||| |||| || ||| ||| || || Sbjct 328542 CACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGACCGTCCTC 328601 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||||| |||||||| || ||||| ||||||||||||||| Sbjct 328602 GAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 328661 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||||| |||| |||| ||||| | ||| || |||| || | || | Sbjct 328662 GATCTTCGACTTGACGTTG-TCGATCGTGTCGGACGACTCAACCTCGAGAGTGATGGTCT 328720 Query 127083 TGCCGGTCAGA 127093 |||| || ||| Sbjct 328721 TGCCAGTGAGA 328731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 329052 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCC 329111 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| ||||| || ||||||||||||||| ||| || ||| Sbjct 329112 GCAAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTC 329171 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | |||||| || | || | || |||||||| || || Sbjct 329172 ACGTTG-TCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGT 329230 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 329231 CTTGACGAAGATCTGCAT 329248 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | |||||||| |||||||| |||||||||||| Sbjct 329617 TCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTG 329676 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| |||| || | |||||||| |||||| |||| ||| | Sbjct 329677 TCCTGAATCTTGGACTTGACGTTG-TCAATGGTGTCCGAGGACTCGACCTCGAGGGTGAT 329735 Query 127078 CGTTTTGCCGGTCAG 127092 || |||||||| || Sbjct 329736 GGTCTTGCCGGTGAG 329750 >seq11 Length=744446 Score = 113 bits (124), Expect = 4e-20 Identities = 120/156 (77%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| ||||| || |||||||||||| Sbjct 649284 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 649343 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| ||||||| |||||| |||| ||| | Sbjct 649344 TCCTGGATCTTGGACTTGACGTTG-TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGAT 649402 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| |||||||| || || || |||||||| Sbjct 649403 GGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 >seq12 Length=718499 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || ||| Sbjct 398519 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 398578 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 398579 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 398638 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||||| |||||| |||| ||| | || ||||| || || || Sbjct 398639 ACGTTG-TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 398697 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 398698 CTTGACGAAGATCTGCAT 398715 >seq4 Length=1343180 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 50653 CGCTTCTATGTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTT 50712 ||| || |||||||| || ||||||||||||||| | | | || ||| |||| | Sbjct 558276 CGCCTCGATGTTGCCGAGGTCGCCGACGTGGCGGACCCTCTCCTCTGGCGCGGCGTGCGT 558217 Query 50713 GCGGCCCAACGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGT---TGCTCGTGTCGCC 50769 |||| || || || ||||| |||| | ||||| |||||||| || ||||||| Sbjct 558216 GCGGTTGAAGGGGTTGTAGTGCCCGCCAGTCGACGCGCAGCCGTCCGTGAAGATGTCGCC 558157 Query 50770 GAATTCGTGCACGTGGAACCCGTG 50793 ||| ||||||||||||| ||||| Sbjct 558156 GAACGCGTGCACGTGGAAGCCGTG 558133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500217511520