Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq31 104 7e-18 >seq31 Length=194661 Score = 104 bits (114), Expect = 7e-18 Identities = 177/247 (72%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 1114 GCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTG-ATAGACGTGGGGGCGGGCGTGGTGGA 1172 ||||| |||||||| ||||| | | || | || ||||| || |||||||| || || Sbjct 50280 GCCCCCCGCTCGGGACTGGC-GAGCAAGCACAGCATCGACGTCGGCGCGGGCGTCGTCGA 50338 Query 1173 TCCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACC-TGTCGGACCACAATTTCA 1231 ||| ||||| || || || ||||| |||| || ||| || ||| | | | |||| Sbjct 50339 CGCCGACTACCGCGGCGAGGTCAAGGTCCTGCTCTTCAACTATGGCGG-CGAGGACTTCA 50397 Query 1232 ACGTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAG-GCGTACTC--GGCTCCGC 1288 | || |||| ||| | |||||||||| || ||||| |||| | | ||| ||| Sbjct 50398 AGGTCGCCAAGGGCGACCGCGTCGCGCAGCTTATTCTGGAGCGCGTGCACATGGCGCCGG 50457 Query 1289 CGACGGCGGAGGTGGAGAGCCACGCGGCGACGGAGCGCGGGGACCGCGGGTTCGGGTCGA 1348 | |||| |||| ||| || || ||||||| |||||||| | ||||||||||||| | Sbjct 50458 TG-CGGC--AGGTCGAGGACCTCGAGGCGACGCTGCGCGGGGCCGGCGGGTTCGGGTCCA 50514 Query 1349 CGGGCGG 1355 ||||||| Sbjct 50515 CGGGCGG 50521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145199831023500