Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 seq12 122 2e-22 seq11 109 1e-18 >seq3 Length=1542526 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| || | || || | || || || Sbjct 329268 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCA 329327 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || ||||| || Sbjct 329328 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 329387 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || ||||||||||| || || || ||||| | ||||| Sbjct 329388 ATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTG 329447 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | ||||| Sbjct 329448 CCGGTCAGAGTCTTGACGAAGATCTGCAT 329476 Score = 116 bits (128), Expect = 8e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | |||||| | || || ||||||||||| || || |||||||| || || | Sbjct 329594 TGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCT 329653 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| ||||| ||||| || ||||| ||||| || ||||||||| ||||||||||||| Sbjct 329654 GGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCG 329713 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || || ||||| | ||||| || || Sbjct 329714 AGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 329747 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| ||||| || || ||||| || || || ||||| || | ||||| | || || Sbjct 328808 CAGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTCCGTCCGTC 328867 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||||||||||| || || ||||| || || || ||||| || ||||| || || ||||| Sbjct 328868 CTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTC 328927 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || ||| ||||| || || ||||| || || || || || || | || Sbjct 328928 CTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGT 328987 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || | ||||| ||||| | ||||| Sbjct 328988 CTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 Score = 104 bits (114), Expect = 5e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||| || || | || || ||| Sbjct 328543 ACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGACCGTCCTCG 328602 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || ||||| || Sbjct 328603 AGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 328662 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || ||||| || || || || || || | ||||| Sbjct 328663 ATCTTCGACTTGACGTTGTCGATCGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTG 328722 Query 195112 CCTGT 195116 || || Sbjct 328723 CCAGT 328727 >seq12 Length=718499 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| || || ||||| || || || ||||| || | ||| || | || || || Sbjct 398506 AACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 398565 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 398566 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 398625 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || || |||||||| || || || ||||| | ||||| Sbjct 398626 GATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTT 398685 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 398686 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 398715 >seq11 Length=744446 Score = 109 bits (120), Expect = 1e-18 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||| || | || || ||||||||||| || |||||||| || || || | Sbjct 649261 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 649320 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| || || ||||| || ||||| || || || ||||||||| || || ||||||| Sbjct 649321 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCG 649380 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || ||||| | ||||| || |||| ||| || ||||| | ||||| Sbjct 649381 AGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480206907166