Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq12 111 1e-19 seq3 104 2e-17 seq11 96.9 2e-15 >seq12 Length=718499 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || || ||||| || || || || Sbjct 398525 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 398584 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 398585 ATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 398644 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || |||| ||| ||||| || |||||||| ||||| || Sbjct 398645 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 398704 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 398705 AAGATCTGCAT 398715 >seq3 Length=1542526 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | ||| | || || ||||| || |||||||| Sbjct 328830 TCCTTCTGGATGTTGTAGTCCGAGAGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAAG 328889 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 328890 ATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTG 328949 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | || ||||| || |||||||| || || || Sbjct 328950 TCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGACG 329009 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 329010 AAGATCTGCATA 329021 Score = 98.7 bits (108), Expect = 6e-16 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || || ||||| || || || || Sbjct 329286 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 329345 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| ||||| || Sbjct 329346 ATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 329403 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | ||| || |||| ||| ||||| || || || |||||||| Sbjct 329404 --TGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTT 329461 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 329462 GACGAAGATCTGCAT 329476 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || || ||||| || || ||||| Sbjct 329058 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAG 329117 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 329118 ATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTG 329177 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | || ||||| || || ||||| ||||| || Sbjct 329178 TCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACG 329237 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 329238 AAGATCTGCATA 329249 >seq11 Length=744446 Score = 96.9 bits (106), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 |||||||||||| | || | || || ||||| || || || || || || || |||||| Sbjct 649263 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 649322 Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCG 34925 || | || | ||||||||||| ||||| |||||| | |||| || | Sbjct 649323 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAG 649382 Query 34926 GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| || |||| ||| ||||| || ||||| |||||||| || ||||||||||| Sbjct 649383 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633212265744