Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20 324 3e-83 seq3 235 1e-56 seq10 132 9e-26 >seq20 Length=453684 Score = 324 bits (358), Expect = 3e-83 Identities = 755/1126 (67%), Gaps = 27/1126 (2%) Strand=Plus/Plus Query 221406 CGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT 221465 |||| ||| || ||||| ||||||||||| ||||| |||||| || |||||| ||| Sbjct 229955 CGCACGACGCGGTGAGGGCGGCGTGGTAGATAGTCTCGAAGATCTTCAGGTTGAG-CTCA 230013 Query 221466 TG-GCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGT 221524 | || ||||| || ||||||||| || || | ||| |||||| || ||||| Sbjct 230014 CGAGCGTCGGGCGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTGTCGGCAAGACCCTGA 230073 Query 221525 ACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAA 221584 || |||| ||||| || | ||| | | |||| || | ||| || ||||| ||| Sbjct 230074 ACGCCGAGACCGACCGGGCGGTGGCGCATGTTCGAGTTGCGCGCCTCGATGACGGGGTAA 230133 Query 221585 AAGTTGA-CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAG 221643 ||||| ||| ||| | | || |||||| |||| ||| || | |||| ||| Sbjct 230134 TAGTTGCGCGT-GATGACCTGGTCAAGGTTCTTGGTGACGACCTTGGTAATCTCGTGCAG 230192 Query 221644 CTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAG 221703 ||||||| | | | || |||| | |||| || ||||| || || Sbjct 230193 CTTCTGGAAGTCGTAGG-----TCTGCGCC----TCGAGG---TCGACAAAGGCTGGGAG 230240 Query 221704 GGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTC 221763 |||| ||| ||||| |||||||| |||||||| | |||| |||||||| Sbjct 230241 AGCAATCGAGGCAAGGTTGCACACGGCAACCTCGTCGGGCGACGAGTACTCGATGATCTC 230300 Query 221764 TGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGC 221823 || ||||||||| |||||||||| || ||||| | || || |||||| ||||| Sbjct 230301 AGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGGAGTTGGC 230360 Query 221824 AGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883 |||||||| |||||||| ||||| ||||||||||| ||| ||| | || || | Sbjct 230361 CGCGTCCTTATAGAGCATGAAGGGGCCGCCAGTCTCGGTCTGGGCCTCGAGGATGGCGAA 230420 Query 221884 CCAGAGTTCTCTGGCGCTCACCGTCCTCTTGAC---TGCACCCTCGGTCTTTTCATACCC 221940 |||||| | ||||| || | || ||| ||| ||||| || | | | | Sbjct 230421 CCAGAGCT-TCTGGGCCTTGATGGTCTTGCGACCCTTGC--CCTCGCGCTCGTACTTCTC 230477 Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000 | |||||| ||||||| || || | ||| | ||||| || ||| |||||| Sbjct 230478 G---TAGAGCTGCTCAAACTCCTCCGAGTGGACGTCGGCGAGGCCGGGGCACTCGGCGGG 230534 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 ||||| || |||||| || | ||| | || ||||||||||||||||||||| Sbjct 230535 GCACATGAGGGTCCAGTCGCCGTCCGACTCGACACGCTTCATGAAGAGGTCCGGGATCCA 230594 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 || || | ||||| || | || ||| ||||||| ||||| ||| || | || || Sbjct 230595 GAGGGCGTAGAAGAGGTCGCGGGCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 230654 Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180 | || || || | ||| |||||||| ||||| || |||| ||| | || || || || Sbjct 230655 GAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCG 230714 Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTAC 222240 ||||||||| ||||| || || | | |||| | || ||| || | || || Sbjct 230715 CTTGTTGCCGCCCTGGTCGACGTAGCGGGCAGTTGCGTCGTAGGCGCGGAGCATGGGGAC 230774 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300 | ||||| || ||||||||||| |||||||| || ||| | | ||| | Sbjct 230775 GATACCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCTTGGCGCGGATGTT-GT 230833 Query 222301 GGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359 || | | |||||| ||||| || || |||||| ||||||| ||||||| |||| Sbjct 230834 GGATGTGAAGGCCGATGCCACCAGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGCGTGT 230893 Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419 | |||||| || || ||||| ||||| | | | || || || ||||||||||| | Sbjct 230894 CGTAGATGCCGTCGATCGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTGCG 230953 Query 222420 ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACA 222479 | || | || |||||| || || || || ||||| || ||||||| | ||||| Sbjct 230954 CGTGGGGCGTACCGGCGTTGAAGAGGGTCGGCGACGCGTGGGTGAAGTAGCGCTCAGACA 231013 Query 222480 TCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 | || | ||| ||||| | ||| | | | | ||| || ||||| || Sbjct 231014 TGAGGTTGTAAGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGGAT 231059 >seq3 Length=1542526 Score = 235 bits (260), Expect = 1e-56 Identities = 551/834 (66%), Gaps = 20/834 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || ||||||||| || ||||| | || Sbjct 118184 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCGTTCTGGACCGCTGAGGAGATCAACCTC 118243 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || ||| | ||| |||| || |||| | | | |||||| | ||| || Sbjct 118244 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAGCGCTACTTTATCG 118301 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || ||||| | || ||||| || || || || || || || |||||||| || |||| Sbjct 118302 AGCACGTGCTCGCGTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCGAGC 118361 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | || || ||| || ||||||||| |||||||| |||||||| | Sbjct 118362 GCTTCTGCGGCGAGGTCCAGATCGCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGA 118421 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||| ||| ||| | ||| || || |||||||| |||| Sbjct 118422 TGGAGAACATCCACTCGGAGACGTACTC---GCTCCTCATCGACACGTACATCCGTGACG 118478 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 |||| | | || || || |||||| ||| ||| ||||||||| ||||| Sbjct 118479 GCGCCCGCCGCAACTACCTCTTCAAGGCGATCGAGACCATCCCCTGCATCAAGAAGAAGG 118538 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | |||||| | ||||||| | | ||| | |||||| |||||| || | | Sbjct 118539 CCGACTGGGCCCTCCGCTGGATCACGGACGACAGCTCGTCGTTTGCCGAGCGCCTCATCG 118598 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||| || || || ||||||||||| ||| || |||||||| ||||||||||||||| Sbjct 118599 CCTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCA 118658 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| || || || |||||||||||| | ||||||| Sbjct 118659 AGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGAGG 118718 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 | ||||||| || ||||||||||| |||| |||| ||| | | || | || | Sbjct 118719 GCCTCCACACCGACTTTGCCTGCCTCCTCTTCACG---CACCTCCGCCGCCGCCCCCACC 118775 Query 26069 AAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 || | || | | |||||| ||||| || ||||||||| ||||||| | Sbjct 118776 CCGACCTCATCGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGTTCCTCACCG 118835 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || |||||| |||| ||||| |||| Sbjct 118836 ACGCCCTCCCCGTCTCCCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGT 118895 Query 26189 ATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAA 26246 ||| ||||||| ||| || || ||| || || | ||| ||| | || | || Sbjct 118896 TTGTCGCCGACCGTCTCCTAGTCGCC--CTCGGCAACCCCAAGATCTGGAACTCGACCAA 118953 Query 26247 CCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 ||| |||||||||||||| | || ||| | | || ||| |||||||||| || Sbjct 118954 CCCCTTCGACTTTATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 119007 >seq10 Length=751894 Score = 132 bits (146), Expect = 9e-26 Identities = 172/236 (73%), Gaps = 9/236 (4%) Strand=Plus/Minus Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 |||||||| ||||||||||||||| ||| || || || |||||||||||||||||| Sbjct 103151 GCCTTTGCGTGTGTGGAGGGCATCTTCTTCTCAGGGTCCTTCGCGGCCATCTTCTGGCTC 103092 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||| ||| ||| ||| |||||||||||||||| | |||||| Sbjct 103091 AAGAAGCGCGGCCTCATGCGCGGCCTGACCTTCAGCAACGAGCTCATCAGCCGCGACGAG 103032 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| || ||||||||||| |||||| | || | || || || || Sbjct 103031 GGCATGCACACCGACTTTGCCTGCCTCCTCTACCAGTACCTCAAGCACC-----GCTGCT 102977 Query 26068 CAAGAGACC---GTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | ||||| || || | ||| || ||||| || ||||||||||||||||| Sbjct 102976 C-GCAGACCGAGGTGCACCGGATCGTCGGCGAGGCCGTCGAGATCGAGAAGGAGTT 102922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843662165120