Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq12 91.5 1e-13 >seq3 Length=1542526 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || || ||||| || || || || || Sbjct 329020 ATGCAGATCTTCGTCAAAACCCTCACGGGCAAGACCATCACGCTGGAGGTCGAGTCCTCC 328961 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 328960 GACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 328901 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| ||||| | | | || || || ||| Sbjct 328900 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGACGGACTCTCTCGGACTACAAC 328841 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || ||||| ||| | || |||| |||| || || Sbjct 328840 ATCCAGAAGGAGTCTACACTCCACCTCGTTCTGCGTCTGCGTGGTGG 328794 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || ||||| || || || || || Sbjct 329248 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTGGAGGTCGAGTCCTCC 329189 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 329188 GACACGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 329129 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| || || ||||| ||||| | | | | || || || ||| Sbjct 329128 CAGCGCCTCATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCGGACTACAAC 329069 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | || | || | |||||||| Sbjct 329068 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGCCTCCGCGGAGG 329022 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || | | Sbjct 329476 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCG 329417 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || |||||||| || Sbjct 329416 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 329357 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || ||||| ||||| | | | | || || || ||| Sbjct 329356 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCGGACTACAAC 329297 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | || | || ||||||| || Sbjct 329296 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGTCTGCGCGGCGG 329250 >seq12 Length=718499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || || | Sbjct 398716 GATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 398657 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 398656 GGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 398597 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || ||||| ||||| | | | | || || || || Sbjct 398596 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 398537 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || ||||| ||||| || ||| Sbjct 398536 CATCCAGAAGGAGTCGACCCTCCAC 398512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897048875440