Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq14 96.9 3e-15 seq4 91.5 1e-13 seq15 86.0 6e-12 >seq3 Length=1542526 Score = 114 bits (126), Expect = 1e-20 Identities = 478/741 (65%), Gaps = 15/741 (2%) Strand=Plus/Plus Query 46518 AACGATGACGAACGTTACTTTATCAAGCACGTGTTGGCGTTCTTTGCCGCCGCCGATAGC 46577 ||||| |||| || ||||||||| |||||||| | |||||||| ||||| | || || Sbjct 118277 AACGACAACGAGCGCTACTTTATCGAGCACGTGCTCGCGTTCTTCGCCGCGTCGGACGGC 118336 Query 46578 ATCGTGAATATTAACCTCATCGATTACATGCAGCAAAAAGTTCCGGAATTG--GAAGCGC 46635 ||||| || |||||| |||| | | | || || ||| || | | || || Sbjct 118337 ATCGTCAACGAGAACCTCGTCGAGCGCTT-CTGCGGCGAGGTCCAGA-TCGCCGAGGCCA 118394 Query 46636 AGTATTTTTACAACCTTCAAGTGCTCATCGAGTGCGTACACACTGAGATGTATAGTCTGC 46695 || || ||| | | || | | || ||| | | ||| | |||| ||| || | Sbjct 118395 AGACGTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCC 118454 Query 46696 TCATAGAACAATTGATTAGAGACGA-GCACGAGCGCGACACGTTGCTGAATGCGTTCGAG 46754 |||| || | || | |||| || || ||| || | | || ||| ||||| Sbjct 118455 TCATCGACACGTACATCCGTGACGGCGCCCGC-CGCAACTACCTCTTCAAGGCGATCGAG 118513 Query 46755 CACGTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACC 46814 | | || ||| | || |||||| | |||||| | |||||| | ||| | | Sbjct 118514 ACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCGCTGGATCACGGACGACAGC 118573 Query 46815 GCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGC 46874 | || | ||||||||| | | || ||||| ||||| ||| | || || |||||| Sbjct 118574 TCGTCGTTTGCCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGC 118633 Query 46875 AGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGT 46934 |||||| |||| || | | || | ||| | ||||| ||||| |||||| Sbjct 118634 TCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCG 118693 Query 46935 AACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAG 46994 |||||| | |||||||||||||| || || ||||| |||||||| || ||| | | Sbjct 118694 AACGAGCTCATCTCGCGCGACGAGGGCCTCCACACCGACTTTGCCTGCCTCCTCTTC--- 118750 Query 46995 ACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGT- 47053 |||| | | || | ||| ||| || || | | ||||| || Sbjct 118751 ACGCACCTCCGCCGCCGCCCCCACCCCGACCTCATCGAGAAGATCATCCGCGAGGCCGTC 118810 Query 47054 GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGC 47113 ||| ||||| ||||||| | || | || || |||||| || | | ||||||||||| Sbjct 118811 GAG-ATCGAGCAGGAGTTCCTCACCGACGCCCTCCCCGTCTCCCTCATCGGCATGAACGC 118869 Query 47114 ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACA 47173 || |||||| | || || |||||||| || || ||||| | || ||||| || Sbjct 118870 CAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTCCTAGTCGCCCTCGG-CA 118928 Query 47174 ACCGAAATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAG 47231 ||| || || | | |||| || || || || |||||| | | || |||||| || Sbjct 118929 ACCCCAAGATCTGGA-ACTCGACCAACCCCTTCGACTTTATGGAGATGATCTCGCTCCAG 118987 Query 47232 GGCAAAACCAATTTTTTCGAG 47252 ||||| |||| || |||||| Sbjct 118988 GGCAAGGCCAACTTCTTCGAG 119008 >seq14 Length=702256 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 51731 AGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGTC 51790 ||||| || ||||| | |||||||| ||| || || || |||| ||||||||||| Sbjct 534107 AGCCTTGATGTTGCCGAGGTCGCCGATGTGCCGGTTCTTGTCGCTCGGCGCGCCGTGGTC 534166 Query 51791 GCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 51850 | | | ||||||| |||| |||| | ||| ||||||||| ||| ||||||||| Sbjct 534167 GTGGTTGAAGGGGTTGTAGTGCGCGCCGGTGGACATGCAGCCGTCACTGAGGTCGCCGAA 534226 Query 51851 TTCGTGCACGTGGAATCCGTG 51871 ||||| |||||||| ||||| Sbjct 534227 CTCGTGGACGTGGAAGCCGTG 534247 >seq4 Length=1343180 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 51732 GCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGTCG 51791 ||||||| ||||| | ||||||||||||||| | | | | | || ||| |||| | Sbjct 558275 GCCTCGATGTTGCCGAGGTCGCCGACGTGGCGGACCCTCTCCTCTGGCGCGGCGTGCGTG 558216 Query 51792 CTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGT---TGCTGGTGTCGCCG 51848 | | | ||||||| |||| |||| | ||||| |||||||| || | |||||||| Sbjct 558215 CGGTTGAAGGGGTTGTAGTGCCCGCCAGTCGACGCGCAGCCGTCCGTGAAGATGTCGCCG 558156 Query 51849 AATTCGTGCACGTGGAATCCGTGC 51872 || ||||||||||||| |||||| Sbjct 558155 AACGCGTGCACGTGGAAGCCGTGC 558132 >seq15 Length=682537 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 51734 CTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGTCGCT 51793 || ||| ||||| | |||||||||||||||| | || | || ||||||||| | Sbjct 651658 CTTGACGTTGCCGAGGTCGCCGACGTGGCGCTCAGAGTCGGTGGGGCCGCCGTGGTTCTT 651599 Query 51794 GCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTC 51853 |||| |||||||||||| |||| ||||| |||||||| | ||||||||| | Sbjct 651598 GCCGTGGGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCCGACGAGAGGTCGCCGAACTG 651539 Query 51854 GTGCACGTGGAATCCGTGCAGG 51875 ||| | |||||| ||| || || Sbjct 651538 GTGGATGTGGAAGCCGCGCTGG 651517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610616151280