Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq20 197 2e-45 seq3 145 9e-30 seq10 95.1 1e-14 seq2 89.7 6e-13 seq8 86.0 8e-12 >seq20 Length=453684 Score = 197 bits (218), Expect = 2e-45 Identities = 673/1041 (65%), Gaps = 31/1041 (3%) Strand=Plus/Plus Query 118527 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG 118586 || || ||||| || || ||||| || | ||||| || | ||| || || || || || Sbjct 230059 TCGGCAAGACCCTGAACGCCGAGACCGACCGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 230117 Query 118587 GTCTCCA---CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 118643 ||| | |||| ||| | || | ||| ||| | || || |||||||| ||| Sbjct 230118 --CTCGATGACGGGGTAATAGTTGCGCGTGATGACCTGGTCAAGGTTCTTGGTGACGACC 230175 Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 118703 || || || || || ||||| | | | || | | | | ||| | |||| | Sbjct 230176 TTGGTAATCTCGTGCAGCTTCTGGAAGTCGTAGGTCTGCGCCTCGAGGTCGACAAAGGCT 230235 Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || || || || || || || ||||| | ||| || | |||||| || Sbjct 230236 GGGAGAGCAATCGAGGCAAGGTTGCACACGGCAACCTCGTCGGGCGACGAGTACTCGATG 230295 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | ||| || ||| |||||||| | || || || || ||||| | | Sbjct 230296 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGGAG 230355 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || ||| ||||| || |||||| | || || ||||| || |||| || ||| || Sbjct 230356 TTGGCCGCGTCCTTATAGAGCATGAAGGGGCCGCCAGTCTCGGTCTGGGCCTCGAGGATG 230415 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTA 118939 || ||||| | || | || | ||| ||| | | ||||| |||||| Sbjct 230416 GCGAACCAGAGCTTCTGGGCCTTGA----TGGTCTTGCGACCCTTGCCCTCGCGCTCGTA 230471 Query 118940 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 118999 ||| |||||| |||||||| || | | || | ||| || || || | Sbjct 230472 CTTCTCGTAGAGCTGCTCAAACTCCTCCGAGTGGACGTCGGCGAGGCCGGGGCACTCGGC 230531 Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 ||||| | ||| | ||| | || || ||| || ||||||||||||||||| ||||| Sbjct 230532 GGGGCACATGAGGGTCCAGTCGCCGTCCGACTCGACACGCTTCATGAAGAGGTCCGGGAT 230591 Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGC 119117 |||||| || ||||||| || || ||| || ||| || | || || || || Sbjct 230592 CCAGAGGGCGTAGAAGAGGTCGCGG--GCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGG 230649 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | || | ||||| | || || |||||||| || || ||||| | |||| | || Sbjct 230650 AGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACC- 230708 Query 119178 TTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGC 119231 | | || || |||||| || || | ||||| |||| | | || ||| Sbjct 230709 --AGGGCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCAGTTGCGTCGTAGGCGCGGAGC 230766 Query 119232 ATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTC 119289 || || | |||||| | || | ||| || || || ||| ||||| | | |||| | Sbjct 230767 ATGGGGACGATACCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCT--TGGCGC 230824 Query 119290 TGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 119349 || | ||||||||| | || || || || || ||| ||||| || ||||| | Sbjct 230825 GGATGTTGTGGATGTGAAGGCCGATGCCACCAGCAGTCTTGGAGATCTGGGCGCAGGTCT 230884 Query 119350 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 119409 |||| || ||||||| || ||||||||||| |||| | |||| |||||||| || Sbjct 230885 TGAGCGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGCGACAAGGAAGCACGACG 230944 Query 119410 ACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC 119469 |||| || | ||| ||||| ||||||||||| || || | ||||||| |||| | Sbjct 230945 ACATCTGCGCGTGGGGCGTACCGGCGTTGAAGAGGGTCGGCGACGCGTGGGTGAAGTAGC 231004 Query 119470 CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 119529 | ||||| || ||| ||||| | |||| | || || || ||||| ||||||| Sbjct 231005 GCTCAGACATGAGGTTGTAAGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGGATACCGA 231064 Query 119530 TCGAGACCCGCATAAACATGT 119550 | || ||||| | ||||| Sbjct 231065 CGGCAACACGCATCAGCATGT 231085 >seq3 Length=1542526 Score = 145 bits (160), Expect = 9e-30 Identities = 347/522 (66%), Gaps = 2/522 (0%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||| |||||||||||| | ||| || | | ||| |||||||||| || || Sbjct 119016 ACGCGCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAAG 118957 Query 129797 GGGTTCTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGACG 129856 ||||| | |||||||| || || || | |||||||| || | ||| Sbjct 118956 GGGTTGGTCGAGTTCCAGATCTTGGGGTTGCCGAGGGCGACTAGGAGACGGTCGGCGACA 118897 Query 129857 TACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCGCG 129916 |||| ||||||| |||| || || |||||| ||||||||| ||||| ||| Sbjct 118896 AACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGGGAGACGGGGAGGGCG 118837 Query 129917 TCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCC 129976 || || |||| ||| ||| || || || || || || | ||| | ||| || Sbjct 118836 TCGGTGAGGAACTCCTGCTCGATCTCGACGGCCTCGCGGATGATCTTCTCGATGAGGTCG 118777 Query 129977 GTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCC 130036 | | || | ||| | | ||||||| |||||| || |||||| ||| Sbjct 118776 GGGTGGGGGCGGCGGCGGAGGTGCGTGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGGCCC 118717 Query 130037 TCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTC 130096 ||||| || |||||||| || |||||||| || || |||||||| || |||||||| Sbjct 118716 TCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTG 118657 Query 130097 AACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCA 130156 | |||||| || | ||| ||||| ||||||||||| ||||| || ||||| || Sbjct 118656 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAAGGCG 118597 Query 130157 AAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGCCCACTGCGC 130215 | ||| ||||| ||||| || || | | || | ||| | ||||| | || Sbjct 118596 ATGAGGCGCTCGGCAAACGA-CGAGCTGTCGTCCGTGATCCAGCGGAGGGCCCAGTCGGC 118538 Query 130216 CTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 ||| |||| ||| || |||| ||||| |||||| | ||||| Sbjct 118537 CTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTTGAAGAG 118496 >seq10 Length=751894 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | |||||||| ||| |||||| || || |||| ||| || Sbjct 103011 GGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTGCTGAAGGTCAGGCC 103070 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||| || |||||||| | |||||| || || || || || ||||||||||| Sbjct 103071 GCGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAAGGACCCTGAGAAGAAGAT 103130 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACG 130164 |||||||||||||| || || | ||| || Sbjct 103131 GCCCTCCACACACGCAAAGGCGATGAGGCG 103160 >seq2 Length=1608611 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 179734 TTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAA 179793 |||||||| || || ||||||||| || | |||| |||||||||||| ||||| ||| Sbjct 497764 TTGAGGAGGGACGGGTAGAAGTAGTCGAGAAAGTTGATGATGAGACCCTTGATGTGCGAA 497705 Query 179794 CCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAG 179840 || |||| ||| ||| ||||| ||||| ||| | || |||||||| Sbjct 497704 CCGTCGTGGTCCTGATCGGTCATGATCATGAGCTGGCCGTAGCGAAG 497658 >seq8 Length=795998 Score = 86.0 bits (94), Expect = 8e-12 Identities = 268/411 (65%), Gaps = 7/411 (2%) Strand=Plus/Minus Query 14062 ACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGC 14121 ||| ||||| || || || || | || ||| ||| || | ||| ||||| || | Sbjct 377904 ACGGTCAAAACGGCCGGGACGCATCAGAGCGGGGTCGAGTACGTCAGGACGGTTGGTACC 377845 Query 14122 CGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATT 14181 |||| || || ||| | || | | | ||||| |||||||| | ||| || || Sbjct 377844 GGCGAGCACGACAATGTGCTCCTTGGTGCCGAAGCCGTCCATCTCGACGAGGAGCTGGTT 377785 Query 14182 GATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCACTG----CGTTGCTTAC 14237 || || ||||| || || || || | || | |||| || ||| ||| | Sbjct 377784 GAGCGTGGACTCGCGCTCGTCGTT-GCCGCCAAAGTTGCCGCCCTTGCCACGTGCCTTGC 377726 Query 14238 CGACGGCGTCAATTTCATCGATGAAAACGATA-CATGGTTGATTTTCACGGGCAACTTCA 14296 ||| |||||| || || || ||||| ||||| | || | | ||| || | | | Sbjct 377725 CGATGGCGTCGATCTCGTCAATGAAGACGATGGCCGGGGCGTTCTTCTTGGCCTGCG-CG 377667 Query 14297 AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG 14356 |||| || ||||| | | || ||| ||||| ||||||||||| || || | || | Sbjct 377666 AAGAGGTCGCGCACACGCGAGGGACCAACACCGACAAACATCTCGACGAACTCGGAACCC 377607 Query 14357 GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTC 14416 || || ||||||||| || | || || ||| | || | ||||||||||||||| Sbjct 377606 GAGACGGAGAAGAAGGGGACCTTGGCCTCGCCAGCGGTAGCCCTGGCGAGGAGGGTCTTA 377547 Query 14417 CCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467 || || || || || | ||| | ||| || || || ||| |||||||| Sbjct 377546 CCAGTACCAGGAGGACCCGAGAGGATGGCGCCGCGGGGAATCTTGGCACCA 377496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434442416880