Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq13 123 8e-23 seq3 123 8e-23 seq12 105 2e-17 >seq13 Length=706379 Score = 123 bits (136), Expect = 8e-23 Identities = 398/615 (65%), Gaps = 2/615 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || || ||||| | | || |||||||| | || || || || | Sbjct 462581 CCCGAGGAGATCTCGTCCATGGTCCTCATCAAGATGAAGGAGACCGCCGAGGCCTACCTT 462640 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | || || | | || || | || || || ||||| || || || | |||||| Sbjct 462641 GGCGGCACCGTCTCCAAGGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCGCAGCGT 462700 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || || || |||| ||| || || | | || || | || || || || Sbjct 462701 CAGGCCACTAAGGACGCCGGCACCATCGCTGGCCTCGAGGTCCTCCGTATCATCAACGAG 462760 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || || || || || || | | ||| || || || || Sbjct 462761 CCCACCGCCGCCGCCATCGCCTACGGCCTCGACAAGAAGTCTGAGGGCGAGAAGAACGTT 462820 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || || | ||||||||||| || || || || || || || | || ||||| Sbjct 462821 CTCATCTTCGACCTTGGTGGTGGTACCTTCGACGTGTCGCTCCTCACCATCGAGGAGGGC 462880 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || || || || ||||| ||||| || || |||||||| || || ||||| || Sbjct 462881 ATCTTCGAGGTCAAGGCCACTGCCGGTGACACCCACCTTGGTGGTGAGGACTTTGACAAC 462940 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGA 349950 |||||||| || || ||| | || || ||||| |||| || | || || Sbjct 462941 CGTCTCGTCAACCACTTCGTTCAGGAGTTCAAGCG-CAAGAACAAGAAGGACATCACCTC 462999 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || | | || | || || || | || || ||||| ||||| ||||| || | || Sbjct 463000 GAACGCCCGTGCCCTCCGCCGTCTCCGCACCGCCTGTGAGCGTGCCAAGCGCACCCTCTC 463059 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | |||| ||||| || || || || || || || |||| || |||| | Sbjct 463060 GTCGGCCGCCCAGACCTCGATCGAGATCGACTCGCTCTACGACGGCATCGACTTCTACAC 463119 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || || || ||||| || || || || | || ||| || || | | || ||||| Sbjct 463120 CTCGATCACCCGTGCCCGCTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGA 463179 Query 350131 TCCTGTGGAAAAAGT 350145 || || || || || Sbjct 463180 GCCCGTCGAGAAGGT 463194 >seq3 Length=1542526 Score = 123 bits (136), Expect = 8e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || || || |||||||| || || || || || || Sbjct 328790 CATACCACCACGCAGACGCAGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTC 328849 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || |||||||| ||||| ||||| || || Sbjct 328850 CGAGAGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGG 328909 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| || || || |||||||| || ||| || || || || |||| || || | | Sbjct 328910 GGGAATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATCGTGTCGGAGGACT 328968 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| || || || ||||| || || |||||||| Sbjct 328969 CGACCTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 >seq12 Length=718499 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || || || || ||||| || || || || || || Sbjct 398485 CATACCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 398544 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || ||||| ||||| ||||| ||||| || || Sbjct 398545 CGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGG 398604 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || |||| || || | || Sbjct 398605 GGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTC 398664 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || || |||||||| Sbjct 398665 GACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 398715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252497408694