Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 9e-16 seq12 93.3 4e-14 seq11 91.5 1e-13 >seq3 Length=1542526 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || | || || ||| |||| || ||||| ||||| ||||| Sbjct 328829 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAA 328888 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| | | | | ||| Sbjct 328889 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC-TGAATCTTGCTCTTCACGT 328947 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||| ||| ||||| || |||| |||||| | || ||||| || ||||| | Sbjct 328948 TGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGA 329007 Query 39272 CAAAGATTTGCAT 39284 | ||||| ||||| Sbjct 329008 CGAAGATCTGCAT 329020 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || | || || || |||| |||||||| ||||||||||| Sbjct 329057 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 329116 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | || ||| |||||| ||| || || | ||| Sbjct 329117 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 329175 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||| ||| ||||| || |||| |||||| | || || || || || || | Sbjct 329176 TGTCGATCGTGTCGGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGA 329235 Query 39272 CAAAGATTTGCAT 39284 | ||||| ||||| Sbjct 329236 CGAAGATCTGCAT 329248 >seq12 Length=718499 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || | ||| || || |||| || ||||| ||||| || || Sbjct 398524 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 398583 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | || ||| |||||| ||| || |||| ||| Sbjct 398584 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 398642 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||| || ||||| || || | ||||| | || ||||| || || || | Sbjct 398643 TGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 398702 Query 39272 CAAAGATTTGCATCT 39286 | ||||| ||||||| Sbjct 398703 CGAAGATCTGCATCT 398717 >seq11 Length=744446 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 39109 TAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGG 39168 || || | ||| || || |||| || ||||| ||||| || || || |||||||||||| Sbjct 649263 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 649322 Query 39169 TCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCT 39227 |||| ||| | || ||| |||||| ||| || |||| ||| | | | ||| || Sbjct 649323 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCCGA 649381 Query 39228 CGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||||| || || | ||||| | || |||||||| || || || ||||| ||||||| Sbjct 649382 GGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCATCT 649440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545086961474