Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001600715.1_202016 -03-01] 98 sequences; 23,155,501 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3 149 6e-31 seq12 134 1e-26 seq11 114 1e-20 seq31 102 8e-17 >seq3 Length=1542526 Score = 149 bits (164), Expect = 6e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| | || || || || || ||||||||| ||||| ||||| ||| Sbjct 329250 CCGCCGCGCAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 329309 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||| ||||| || |||||||| ||||| | || Sbjct 329310 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 329369 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| |||||| | Sbjct 329370 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATGGTGTCCGACGACTCGA 329427 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||| ||||| ||||| ||||||||| Sbjct 329428 CCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 329477 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | || || || || || ||||||||| ||||| ||||| ||| Sbjct 329022 CCTCCGCGGAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 329081 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||| || || || |||||||| ||||| | ||| Sbjct 329082 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGGGGG 329141 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | |||||| ||||| || Sbjct 329142 ATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACGTTGTCGATCGTGTCGGAGGACTCGAC 329200 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| || || || || || || ||||| ||||| |||||||| Sbjct 329201 CTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 329248 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| ||||| ||| Sbjct 328794 CCACCACGCAGACGCAGAACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAG 328853 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||||||||||||||| || || || ||||| ||||| | |||| Sbjct 328854 AGAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 328913 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || || |||| ||| | | | |||||| ||||| || Sbjct 328914 ATACCCTCCTTGTCCTGAATCTTGCTCTTC-ACGTTGTCGATCGTGTCGGAGGACTCGAC 328972 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| || || || ||||| || || || ||||| |||||||| Sbjct 328973 CTCCAGCGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAGATCTGCAT 329020 Score = 122 bits (134), Expect = 8e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || ||||| | |||||| || || || ||||||||| ||||| |||||| Sbjct 328523 CGCCGCCACGAAGACGGAGCACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGC 328582 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 || || || |||| |||||||||||||| ||||| ||||||||||| ||||| | | Sbjct 328583 TCAGCGTACGACCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCAGGAG 328642 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||||| ||| || ||| ||| | | | |||||| |||||| Sbjct 328643 GGATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATCGTGTCGGACGACTCA 328701 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAG 41841 ||||| | || || || || || || || Sbjct 328702 ACCTCGAGAGTGATGGTCTTGCCAGTGAG 328730 >seq12 Length=718499 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| ||||| || Sbjct 398489 CCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 398548 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 398549 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGG 398608 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 398609 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATCGTGTCCGAGGACTCGAC 398667 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || ||||| || ||||| ||||| |||||||| Sbjct 398668 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 398715 >seq11 Length=744446 Score = 114 bits (126), Expect = 1e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| |||||||||||||| ||||| || || ||||| ||| Sbjct 649263 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 649322 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | ||| | || |||||||||| ||| || ||| ||| | | | ||||| Sbjct 649323 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATCGTGTCCGA 649381 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| | || || || || |||||||| ||||| ||||| |||||||| Sbjct 649382 GGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 649438 >seq31 Length=194661 Score = 102 bits (112), Expect = 8e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 |||||||| || || || || || || ||||||||| | |||||||| ||||| || ||| Sbjct 50274 CGTATCGCCCCCCGCTCGGGACTGGCGAGCAAGCACAGCATCGACGTCGGCGCGGGCGTC 50333 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAAGAGGA 85918 ||||||||||||||||||| | |||| || | ||||||||| | |||| ||||| Sbjct 50334 GTCGACGCCGACTACCGCGGCGAGGTCAAGGTCCTGCTCTTCAACTATGGCGGCGAGGA 50392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303433677600