Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 104 5e-17 seq8 98.7 2e-15 seq7 84.2 5e-11 >seq2 Length=6146035 Score = 104 bits (114), Expect = 5e-17 Identities = 119/159 (75%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | |||||||| |||||||| |||||||| | | || || || || ||||| || Sbjct 1862849 ATGTGCCAGTACATGGAATTCGTCGCCGACCGGCTGGTCGTCGCTCTCGGCTACGACAAG 1862908 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 | ||| ||||| || ||||||| | ||||||||||| ||||| ||||| ||| || Sbjct 1862909 ATCTACCACTCTGCAAATCCCTTTGACTGGATGGAGCTCATCTCGCTGCAAGGCAAGGCC 1862968 Query 230590 AACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA-GGCC 230627 ||||| ||||| ||| ||||| | || |||| |||| Sbjct 1862969 AACTTTTTCGAGTCGCGCGTCAGCGCGTACCAGATGGCC 1863007 >seq8 Length=1019311 Score = 98.7 bits (108), Expect = 2e-15 Identities = 297/446 (67%), Gaps = 12/446 (3%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 |||||||||||||||||| | |||| | || || ||||| | || || || Sbjct 936613 TCGTTTGCCGAGCGTCTCATTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCG 936554 Query 230230 TTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAA 230288 || |||| |||| || ||||| ||| ||| | ||||| || ||| | || || Sbjct 936553 TT-TGCGTCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGACTCACATTCTCGAA 936495 Query 230289 CGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAA 230347 |||| | ||| || |||||||||||||| || | | || | | ||| | ||| Sbjct 936494 CGAGCTGATCTCGCGTGACGAGGGTCTCCA-CACCGACTTTGCCTGTCTTCTCC--TCAG 936438 Query 230348 --AGCTCCAGAACAAGCTACCATTCG-AGACGGTCAAACAAATCATTACAGAAGCAGTTG 230404 | |||| | || ||| || | ||| |||| | ||||| | || || || Sbjct 936437 CCACCTCCGCCGCC-GCCCCCACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCA 936379 Query 230405 AAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCT 230463 | | || |||||||| || || || | || ||| | || |||||||||||||| Sbjct 936378 AGATTGAGCAGGAGTTCCTTACCGAGGCCCTCCCC-GTCTCGCTGATTGGCATGAACGCC 936320 Query 230464 GAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTAC 230523 | || ||| | |||||||| || || || |||||||| | | || || || || || Sbjct 936319 AACCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTCGTCGCCCTGGGCAAC 936260 Query 230524 GAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGG 230583 || || ||||| || | | |||||||| | || |||||| | || ||||| || || Sbjct 936259 GACAAGATGTACCACGCCACCAACCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGC 936200 Query 230584 AAGACCAACTTCTTCGAAAAGCGTGT 230609 ||| | ||||||||||| |||||| Sbjct 936199 AAGGCAAACTTCTTCGAGTCGCGTGT 936174 >seq7 Length=1409272 Score = 84.2 bits (92), Expect = 5e-11 Identities = 290/444 (65%), Gaps = 20/444 (5%) Strand=Plus/Minus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 || ||||| ||||| | || || || ||| || ||||| |||| | | || ||| Sbjct 1314731 TTGGTGAAAATATAACGAGCGCTGGCTGCGTCCTTTCCACCTTGCATGCGAGTACCGAAC 1314672 Query 281799 TGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTG 281858 ||||| | ||| | | ||||||||| ||||| || || | | ||| || || Sbjct 1314671 TGACCGTTGGGCTCGAGCAGGTTAATGTTGTTGCTGCCCACAAAGTTCTGGGCAAGTCCA 1314612 Query 281859 ACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAA 281918 || |||||| | || || ||||||||||| || || ||| || | ||||||| Sbjct 1314611 ACAATTGTCGACGTCAGACTGACTTCACCGTGGTGGTACGCCGTGTTCTCCGAAACATAA 1314552 Query 281919 CCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAA--AGCGCAATATA 281976 |||| || ||| || ||||| | || | | ||| || ||||| || |||| | | Sbjct 1314551 CCACCGAGCTGGGCGACCTTGATTTCCTTCTTGAGGTTACGCTTGAAGCAG-GCAA-AGA 1314494 Query 281977 ATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGC----GTTCC 282032 || || |||||| ||||||| || || |||| || || ||| | ||| Sbjct 1314493 TGACCTTGCGTTGACCGGGCTTGAGGCCGTCTGCGACCGAGGGGATGGAACGAATGTTGT 1314434 Query 282033 AGGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGTCGGGAACGGGAACCTCG 282092 || ||| ||||| | ||| || ||||||| | ||||| | | ||||| | Sbjct 1314433 CGGCCAT----GGAGAAGAGAATGAGCTCCTTGTTGACAAAGTCCTGGAGGGGAA---TG 1314381 Query 282093 GGCT---TCTTGTGGTCAAGTTGGTTTCCCGGCTCGTA-TGCCGTCATCCACTCCTTGCG 282148 | || | | |||||| || | | || |||| | | ||||| | |||||||||||| Sbjct 1314380 GTCTTAATGTCGTGGTCGAGGTAAGTACCAGGCTTGAACTGCCG-AAGCCACTCCTTGCG 1314322 Query 282149 ATCCTCGGCCCGAGTCTTGTTGAA 282172 || |||||| |||||||||| Sbjct 1314321 GTCGTCGGCCTTCTTCTTGTTGAA 1314298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823715379230