Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 210 2e-49 seq2 156 4e-33 seq1 105 7e-18 >seq8 Length=1019311 Score = 210 bits (232), Expect = 2e-49 Identities = 394/570 (69%), Gaps = 18/570 (3%) Strand=Plus/Minus Query 116869 CATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGC----- 116923 || ||||||| | |||||||| | || ||| |||||||||||||||| | ||| Sbjct 936770 CAGGGAGAACATTCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTCGCGACAA 936711 Query 116924 TCTTCGGAGG-AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGA 116982 | ||| | || | ||| || |||||||| |||| || || ||| | || | Sbjct 936710 TGCTCGCCGCCAGTATCTC------TTTAACGCCATTGAGAACATTCCCTGCATTAAGAA 936657 Query 116983 GAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCC 117041 ||||||||| ||||| || ||||||||| | | | || | | || | || | |||||| | Sbjct 936656 GAAGGCCGACTGGGCTCTCCGCTGGATCTCGGAC-GACAAGTCGTCGTTTGCCGAGCGTC 936598 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | | ||||| || ||||||||||| ||||||| || ||| || || |||| || | Sbjct 936597 TCATTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTTGCGTCCATTTTCT 936538 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| ||||| ||||||||||| || || ||| |||||||| ||||| | | Sbjct 936537 GGCTCAAGAAGCGCGGTCTCATGCCCGGACTCACATTCTCGAACGAGCTGATCTCGCGTG 936478 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || ||||||||||||| | || ||| || | | || || Sbjct 936477 ACGAGGGTCTCCACACCGACTTTGCCTGTCTTCTCCTCAGCCACCTCCGCCGCCGCCCCC 936418 Query 117222 GCGCGG-CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | ||| | || ||| ||||| ||| || || ||| || |||||| ||||| Sbjct 936417 ACCCGGACACG-ATCAACAAGATCATCAAGGAGGCCGTCAAGATTGAGCAGGAGTTCCTT 936359 Query 117281 ACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 ||||| || || || || ||| | || | || || || | |||| || ||||| Sbjct 936358 ACCGAGGCCCTCCCCGTCTCGCTGATTGGCATGAA-CGCCAACCTCATGTGCCAGTACAT 936300 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||| ||||||||| | ||||| ||| |||| | || |||| ||| || | | Sbjct 936299 TGAGTTTGTCGCCGACCGTCTGCTCGTCGCCCTGGGCAACGACAAGATGTACCACGCCAC 936240 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC 117429 |||||| | ||||| ||| | | ||||| Sbjct 936239 CAACCCCTTCGACTTCATGGAGATGATCTC 936210 Score = 174 bits (192), Expect = 2e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||||||| |||| ||||| || | Sbjct 996631 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 996572 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| |||||||| ||| | |||||| Sbjct 996571 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 996512 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||||||||| ||||| || |||| |||||||| |||||||||| Sbjct 996511 CAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAAC 996452 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||||||| || || || Sbjct 996451 ATCCAGAAGGAGTCCACGCTTCACCTCGT 996423 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| ||||| ||||||||| |||| || || | | |||| | | | |||| |||| Sbjct 996838 CTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAACG-TCAA 996780 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| |||||||| ||| | |||||||| || ||||||| ||| || Sbjct 996779 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTCATCTTCGCTGG 996720 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || || | || || || |||||||||||||||||||||| ||||||| Sbjct 996719 CAAGCAGCTCGAGGATGGCCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCCACGCT 996660 Query 40890 GCATCTAGT 40898 || || || Sbjct 996659 TCACCTCGT 996651 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| || || || |||| |||||| | | Sbjct 996403 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACGATTACGCTCGAGGTCGAATCGTCG 996344 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| ||||| ||||| | ||||| Sbjct 996343 GACACGATCGACAACGTT-AAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCA 996285 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| ||||| || || | ||||| ||| |||||||| Sbjct 996284 GCAGCGTCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCTCGGACTACAA 996225 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || || || || Sbjct 996224 CATTCAGAAGGAGTCGACTCTCCACCTTGT 996195 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| || ||||| | || || || | || Sbjct 996175 ATGCAGATTTTCGTCAAGACGCTTACCGGCAAGACGATCACTCTTGAGGTTGAGTCGTCC 996116 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| || || | ||||| Sbjct 996115 GACACGATCGACAACG-TGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 996057 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || || | || || ||| |||||||| Sbjct 996056 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACACTCTCGGACTACAA 995997 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | ||||| || || || Sbjct 995996 CATTCAGAAGGAGTCGACGCTCCACCTCGT 995967 Score = 82.4 bits (90), Expect = 8e-11 Identities = 100/133 (75%), Gaps = 5/133 (4%) Strand=Plus/Minus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGA-CAC 116706 ||||| ||||| |||| ||||||||||||| ||||||| | |||| || || | | Sbjct 937128 TACAAGAAGGCTCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTCGCCCCTGATCTC 937069 Query 116707 GAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763 | ||||||||| | | ||||||||||||||| | |||||| ||||||| || || Sbjct 937068 CA-CGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTCATCGAGCACGTCCTTGC 937010 Query 116764 CTTTTTCGCCGCC 116776 ||| || || ||| Sbjct 937009 CTTCTTTGCTGCC 936997 >seq2 Length=6146035 Score = 156 bits (172), Expect = 4e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| | || ||||| || | Sbjct 1714783 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 1714724 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| |||||||||||| | ||||| Sbjct 1714723 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 1714665 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 1714664 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 1714605 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 1714604 CATCCAGAAGGAGTCGACCCTCCACCTCGT 1714575 Score = 105 bits (116), Expect = 7e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097 |||||| | || ||||| || || ||| |||||||||| || || || ||||| Sbjct 1862522 CGCCTGATTGCGTTCGCCTGTGTTGAAGGCATCTTCTTTTCCGGATCGTTTGCGGCCATT 1862581 Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157 || ||||| ||||| ||||| || |||| ||| || || ||| ||||||||||||||| Sbjct 1862582 TTCTGGCTAAAGAAGCGCGGACTAATGCGCGGGCTCACATTCTCCAACGAGCTCATCTCG 1862641 Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 | |||||||| |||| ||||||||| || |||| Sbjct 1862642 CGTGACGAGGGCATGCACACCGACTTTGCGTGCCTGCT 1862679 >seq1 Length=6933627 Score = 105 bits (116), Expect = 7e-18 Identities = 125/167 (75%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA- 40760 || || || ||||| ||||| ||||||||| | || ||||| | | |||| | | Sbjct 1728529 GTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCGGACACGATCGAC 1728588 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 |||| |||||| || || | ||||| |||||||||||| | |||||||| || ||||| Sbjct 1728589 AACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTCAT 1728647 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 || ||| ||||| ||||| || |||| |||||||| ||||||| Sbjct 1728648 CTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 1728694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219064754960