Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq8 122 6e-23 seq2 116 2e-21 seq1 96.9 2e-15 >seq8 Length=1019311 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| |||||||||||||| Sbjct 996405 CCACCGCGGAGACGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAA 996464 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 996465 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 996524 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || ||||| Sbjct 996525 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 996584 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || || || ||||||||||| Sbjct 996585 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | ||| || ||||| ||||||||||| || Sbjct 996177 CCACCACGCAGACGGAGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996236 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| || || || || ||||||||||| || Sbjct 996237 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGG 996296 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| || | ||||||||| Sbjct 996297 ATACCCTCCTTGTCCTGAATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGACC 996356 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||| || || |||||||| | ||| || || ||||||||||| Sbjct 996357 TCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 Score = 109 bits (120), Expect = 4e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| |||| | || || | ||||||||| ||||| Sbjct 996669 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 996728 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 996729 ATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 996788 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAG 34368 | || | || | || || || || | |||||||| ||||||||||| Sbjct 996789 TCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAG 996838 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || || ||||| ||||||||||| || Sbjct 995949 CCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996008 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| |||||||| || ||||||||||| || Sbjct 996009 AGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 996068 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| |||| ||| || || Sbjct 996069 ATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAACC 996128 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || |||||||| || || || || || |||||||| Sbjct 996129 TCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 >seq2 Length=6146035 Score = 116 bits (128), Expect = 2e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || ||| |||| || | ||||||||| ||||| Sbjct 1714593 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1714652 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 1714653 ATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1714712 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| || | |||||||| ||||| || || || || || Sbjct 1714713 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 1714772 Query 34379 AAGATCTGCATCGC 34392 || |||||||| || Sbjct 1714773 AAAATCTGCATGGC 1714786 >seq1 Length=6933627 Score = 96.9 bits (106), Expect = 2e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 34212 TGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCT 34271 ||||||| || || ||| |||| || | ||||||||| ||||| ||||| ||||||| Sbjct 1728694 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 1728635 Query 34272 GGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGG 34331 |||| ||| | || ||||||||| ||||| ||| | | | | |||| || | Sbjct 1728634 GGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCG 1728575 Query 34332 TCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 ||| ||||| || | |||||||| ||||||||||| || || || Sbjct 1728574 ACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1728529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071917313760