Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 seq2 89.7 6e-13 >seq8 Length=1019311 Score = 131 bits (144), Expect = 2e-25 Identities = 181/250 (72%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| || || ||| ||| ||||||||||| | || | ||||| || || ||||| Sbjct 936449 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGAATGTGAG 936508 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 ||||||||| || || ||||| || ||||| || ||||| || || || || || ||||| Sbjct 936509 TCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGACGCAAACGAGCCAGAGAAGAA 936568 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC--CGGC--GCTGTCAT 33756 ||| || || || |||||||||||||| || | ||| || ||| || | | ||| Sbjct 936569 GATACCCTCGACGGCAGCAAAGGCAATGAGACGCTCGGCA-AACGACGACTTGTCGTCCG 936627 Query 33757 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33816 ||||| ||||||| ||||||||||| || | || || || | || ||||| | Sbjct 936628 AGATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTAATGCAGGGAATGTTCTCAATGGCGT 936687 Query 33817 TAAAGAGATA 33826 |||||||||| Sbjct 936688 TAAAGAGATA 936697 >seq2 Length=6146035 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||||| |||||||| | || | ||||| || || ||||| Sbjct 1862673 CACGCAAAGTCGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAATGTGAGC 1862614 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 ||| ||||||| || ||||| || ||||| || |||| || || ||||||||||||||| Sbjct 1862613 CCGCGCATTAGTCCGCGCTTCTTTAGCCAGAAAATGGCCGCAAACGATCCGGAAAAGAAG 1862554 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33730 || ||||| || || || ||||| || Sbjct 1862553 ATGCCTTCAACACAGGCGAACGCAATCAG 1862525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817434672880