Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 seq2 82.4 5e-11 >seq1 Length=6933627 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 33523 GCCGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGC 33582 |||||||| ||| | ||||||||| | ||| | || || || |||| ||| Sbjct 4884911 GCCGATGGACTCAAGTTTGTCAAGATCCGTATCCGCTCAACGCGTATCCCCCAGATTGGC 4884852 Query 33583 GACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTG 33641 ||||||||||| ||| |||||| | ||||||| || || || | |||| ||| Sbjct 4884851 GACAAGTTTGCGTCGCGTCACGGTC-AGAAGGGTACTATTGGTATCACGTACCGCCAAGA 4884793 Query 33642 GGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTT 33701 ||||||||||||||||||||| || | || ||| | ||||||||||||| || | Sbjct 4884792 GGACATGCCGTTCACGGCCGAGGGTATCACGCCCGACATTATCATCAACCCGCACGCCAT 4884733 Query 33702 CCCCTCGCGCATGAC 33716 || ||||| ||||| Sbjct 4884732 TCCGTCGCGTATGAC 4884718 >seq2 Length=6146035 Score = 82.4 bits (90), Expect = 5e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 22761 TGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTC 22820 |||||||||| || | ||||| || || ||||||||||| |||||||| ||||| || Sbjct 1862542 TGTTGAAGGCATCTTCTTTTCCGGATCGTTTGCGGCCATTTTCTGGCTAAAGAAGCGCGG 1862601 Query 22821 GCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTG 22880 || |||| ||| | | || ||||||||| | || |||||||| || | ||| Sbjct 1862602 ACTAATGCGCGGGCTCACATTCTCCAACGAGCTCATCTCGCGTGACGAGGGCATGCACAC 1862661 Query 22881 TGACTTTGCTTGTATGCT 22898 |||||||| || |||| Sbjct 1862662 CGACTTTGCGTGCCTGCT 1862679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233508826463