Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 3e-15 >seq8 Length=1019311 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | || | ||| | ||| | ||| ||||| || |||||||| || || Sbjct 995946 TGGCCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCC 996005 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | ||| | || |||||||| || || || | ||||| || ||||| || ||| Sbjct 996006 GAGAGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGA 996065 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || || || ||||| ||| || || | | || | ||||||| | ||| Sbjct 996066 GGAATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCA 996125 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||| || | |||||||||||| | ||| || ||||| || |||||| Sbjct 996126 ACCTCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCATA 996176 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||| | || ||||| || |||||||| || || Sbjct 996177 CCACCACGCAGACGGAGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996236 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||| || || ||| |||| ||||| ||||| || ||||| Sbjct 996237 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGG 996296 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | ||| | | || | ||||| | | || || Sbjct 996297 ATACCCTCCTTGTCC-TGAATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGAC 996355 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | ||||||||||||||| || || ||||| || |||||| Sbjct 996356 CTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATA 996404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063869783200