Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 140 5e-28 seq2 100 4e-16 >seq8 Length=1019311 Score = 140 bits (154), Expect = 5e-28 Identities = 184/251 (73%), Gaps = 7/251 (3%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||| ||| ||||||||||| | || || ||||| || || ||||| Sbjct 936449 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGAATGTGAG 936508 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 ||||||||| || || ||||| || ||||| || ||||||||||| || ||||| ||||| Sbjct 936509 TCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGACGCAAACGAGCCAGAGAAGAA 936568 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG-CT----GTCA 50133 ||| || || || || |||||||||| || | ||| || ||| | || || ||| Sbjct 936569 GATACCCTCGACGGCAGCAAAGGCAATGAGACGCTCGGCA-AAC-GACGACTTGTCGTCC 936626 Query 50134 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 ||||| ||||||| ||||||||||| || | || || || | || ||||| Sbjct 936627 GAGATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTAATGCAGGGAATGTTCTCAATGGCG 936686 Query 50194 TTAAAGAGATA 50204 ||||||||||| Sbjct 936687 TTAAAGAGATA 936697 >seq2 Length=6146035 Score = 100 bits (110), Expect = 4e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||| |||||||| | || || |||||||| || ||||| Sbjct 1862673 CACGCAAAGTCGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAATGTGAGC 1862614 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 ||| ||||||| || ||||| || ||||| || |||| |||||| || || ||||||||| Sbjct 1862613 CCGCGCATTAGTCCGCGCTTCTTTAGCCAGAAAATGGCCGCAAACGATCCGGAAAAGAAG 1862554 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAA 50104 || ||||| || ||| || |||| Sbjct 1862553 ATGCCTTCAACACAGGCGAACGCAA 1862529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268611454440