Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 seq2 89.7 7e-13 >seq8 Length=1019311 Score = 131 bits (144), Expect = 2e-25 Identities = 180/250 (72%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||| ||| |||||||| || | || | ||||| || || ||||| Sbjct 936449 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGAATGTGAG 936508 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 ||||||||| || || ||||| || ||||| || || |||||||| || ||||| ||||| Sbjct 936509 TCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGACGCAAACGAGCCAGAGAAGAA 936568 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GTCAT 42239 ||| || || || || ||||||||||| || | ||| || ||| ||| ||| Sbjct 936569 GATACCCTCGACGGCAGCAAAGGCAATGAGACGCTCGGCA-AACGACGACTTGTCGTCCG 936627 Query 42240 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 42299 ||||| ||||||| ||||||||||| || | || || || | || ||||| | Sbjct 936628 AGATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTAATGCAGGGAATGTTCTCAATGGCGT 936687 Query 42300 TAAAGAGATA 42309 |||||||||| Sbjct 936688 TAAAGAGATA 936697 >seq2 Length=6146035 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 |||||||| || ||||| ||| ||||||| || ||||| || ||||| || || | |||| Sbjct 1862631 TCGTTGGAGAATGTGAGCCCGCGCATTAGTCCGCGCTTCTTTAGCCAGAAAATGGCCGCA 1862572 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAG 42213 || ||||| ||||||||||| ||||| || || || ||||| || Sbjct 1862571 AACGATCCGGAAAAGAAGATGCCTTCAACACAGGCGAACGCAATCAG 1862525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139023825960