Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=1019311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || ||| |||| ||||| ||||| || ||||| || || || ||| Sbjct 996249 TCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTG 996308 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || || | | || | |||||||| | ||| || || | || | | Sbjct 996309 TCCTGAATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGACCTCGAGCGTAATC 996368 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||||||||||||| || || ||||| || |||||| Sbjct 996369 GTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATA 996404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014266908720