Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8 217 2e-51 seq4 170 3e-37 seq2 102 1e-16 >seq8 Length=1019311 Score = 217 bits (240), Expect = 2e-51 Identities = 411/600 (69%), Gaps = 21/600 (4%) Strand=Plus/Minus Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TCCG 125315 |||||| | |||||||| | ||||| || || |||| |||||||||||| | | Sbjct 936766 GAGAACATTCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTCGCGACAATGCT 936707 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | || | | ||||||||||| || || | | || | || || ||||| Sbjct 936706 CGCCGCCAGTAT---CTCTTTAACGCCATTGAGAACATTCCCTGCATTAAGAAGAAGGCC 936650 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | || |||||| ||||||||||| |||| ||||| | || | || Sbjct 936649 GACTGGGCTCTCCGCTGGATCTCGGACGACAAGTCGTCGTTTGCCGAGCGTCTCATTGCC 936590 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 || || ||||| ||||| |||||||| || || |||||| |||| || ||||||||| Sbjct 936589 TTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTTGCGTCCATTTTCTGGCTCAAG 936530 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 |||||||| |||||||||||||| || | |||||| | || || || |||||||| Sbjct 936529 AAGCGCGGTCTCATGCCCGGACTCACATTCTCGAACGAGCTGATCTCGCGTGACGAGGGT 936470 Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615 || ||| ||||||||| ||| | | | || | | || || | || | || Sbjct 936469 CTCCACACCGACTTTGCCTGTCTTC---TCCTCAGCCACCTCCGCC------GCCGCCCC 936419 Query 125616 AGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTA 125675 | || | | ||| ||| || | | || ||||| | ||| || || ||||| || Sbjct 936418 CACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATTGAGCAGGAGTTCCTT 936359 Query 125676 ACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATA 125735 ||||| |||| || ||| |||||||||||||| ||| || |||||| ||||||| Sbjct 936358 ACCGAGGCCCTCCCCGTCTCGCTGATTGGCATGAACGCCAACCTCATGTGCCAGTACATT 936299 Query 125736 GAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGCC 125792 |||||||| || || ||||| || || || ||| || |||||| ||| ||||| Sbjct 936298 GAGTTTGTCGCCGACCGTCTGCTCGTCGCCCTG---GGCAACGACAAGATGTACCACGCC 936242 Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 | || ||||| || |||||| | || || || |||| ||| | ||||| |||||| Sbjct 936241 ACCAACCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGGCAAACTTCTTCGAG 936182 >seq4 Length=4798900 Score = 170 bits (188), Expect = 3e-37 Identities = 320/464 (69%), Gaps = 10/464 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || ||||| | ||| ||||| | || ||||||||||| ||| Sbjct 1422216 CAGGGTGGCAACAAGCGTCCCGGCGCCTTCGCCATCTACCTTGAGCCTTGGCACGCCGAC 1422275 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||||||| |||| | || || ||| ||| || |||| || ||| | ||| Sbjct 1422276 GTCTTTGACTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGTGCCCGTGAC 1422335 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || |||||| | || || | ||||||||||| ||| | |||||||| Sbjct 1422336 CTCTTCTACGCCCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGGCCGACGGTG-- 1422393 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| |||||||||| | || || ||||| || || | || ||| Sbjct 1422394 -ACTGGACCCTCATGTGCCCCGCCGAGTGCCCTGGTCTCTCGGACGTCCACTCGGAGGAG 1422452 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171 ||||||||| ||| | ||||||| |||||| | || |||| | || | || Sbjct 1422453 TTTGAGGCCCTCTACGAGAAGTACGAGCGTGAGGGCAAGGGCCGCAAGACCA-TCAAGGC 1422511 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| ||||| | ||| ||| |||||||| ||| | ||| | Sbjct 1422512 TC-AGAAGCTCTGGTTCTCCATCCTCGAGGCCCAGACTGAGACTGGCGGTCCCTTCATGC 1422570 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 |||||||||| | | || ||||| ||||| | ||| | ||||| |||||| | Sbjct 1422571 TCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCACTATCAAGTCGT 1422630 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 |||| || ||||| || || | |||||| || | ||||||||| Sbjct 1422631 CCAACCTTTGCACTGAGATCATCGAGTACTCCGCCCCGGACGAG 1422674 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 |||||||||||||||||||||||| | ||| | | || || | ||||||||| | Sbjct 1423392 ATCTACAAGACTGTCTGGGAGATTTCTCAGAAGGCTGTCATTGACCTTGCTGCCGACCGT 1423451 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 |||| || ||| |||||| || ||| | || | || ||||| | ||| | | | | Sbjct 1423452 GGTGCCTTCATCGACCAGTCGCAGTCGCTTAACATCCACCTTGCCAACCCCTCGTTC--T 1423509 Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214 || | | || || || ||||| |||| ||||| || ||||||||||| || |||| Sbjct 1423510 CGCAGCTCACCTCTATGCACTTCTACGGCTGGAAGCGTGGACTCAAGACGGGTATCTACT 1423569 Query 98215 ATCT 98218 | || Sbjct 1423570 ACCT 1423573 >seq2 Length=6146035 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||| | || |||||| || || |||||||||||||| || ||||||||||| || Sbjct 1862525 CTGATTGCGTTCGCCTGTGTTGAAGGCATCTTCTTTTCCGGATCGTTTGCGGCCATTTTC 1862584 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||||||||| |||| ||| || || | |||||| | || || || Sbjct 1862585 TGGCTAAAGAAGCGCGGACTAATGCGCGGGCTCACATTCTCCAACGAGCTCATCTCGCGT 1862644 Query 125547 GACGAGGGCCTACACTGTGACTTTGC 125572 ||||||||| | ||| |||||||| Sbjct 1862645 GACGAGGGCATGCACACCGACTTTGC 1862670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059005471960