Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8 140 4e-28 seq2 93.3 5e-14 >seq8 Length=1019311 Score = 140 bits (154), Expect = 4e-28 Identities = 183/250 (73%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||| ||| ||||||||||| | || || ||||| || || ||||| Sbjct 936449 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATCAGCTCGTTCGAGAATGTGAG 936508 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 ||||||||| || || ||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 936509 TCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGACGCAAACGAGCCAGAGAAGAA 936568 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC--CGGC--GCTGTCAT 33478 ||| || || || |||||||||||||| || | ||| || ||| || | | ||| Sbjct 936569 GATACCCTCGACGGCAGCAAAGGCAATGAGACGCTCGGCA-AACGACGACTTGTCGTCCG 936627 Query 33479 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538 ||||| ||||||| ||||||||||| || | || || || | || ||||| | Sbjct 936628 AGATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTAATGCAGGGAATGTTCTCAATGGCGT 936687 Query 33539 TAAAGAGATA 33548 |||||||||| Sbjct 936688 TAAAGAGATA 936697 >seq2 Length=6146035 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||||| |||||||| | || || |||||||| || ||||| Sbjct 1862673 CACGCAAAGTCGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAATGTGAGC 1862614 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 ||| ||||||| || ||||| || ||||| || |||| || || ||||| ||||||||| Sbjct 1862613 CCGCGCATTAGTCCGCGCTTCTTTAGCCAGAAAATGGCCGCAAACGATCCGGAAAAGAAG 1862554 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33452 || ||||| || || || ||||| || Sbjct 1862553 ATGCCTTCAACACAGGCGAACGCAATCAG 1862525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947036476360