Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 seq8 125 7e-24 seq1 87.8 2e-12 >seq2 Length=6146035 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | |||||||||||| || |||||||| || Sbjct 1714557 CCACCACGAAGGCGTAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 1714616 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1714617 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 1714676 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 1714677 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 1714736 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || || || || ||||||||||||||| Sbjct 1714737 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCATG 1714784 >seq8 Length=1019311 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | || |||||||| || |||||||| ||| Sbjct 996405 CCACCGCGGAGACGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAA 996464 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 996465 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 996524 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || || | |||||||| Sbjct 996525 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 996584 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || || || || ||||| |||||||| Sbjct 996585 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 Score = 123 bits (136), Expect = 2e-23 Identities = 238/344 (69%), Gaps = 9/344 (3%) Strand=Plus/Minus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || ||||||||| | | |||||||| || ||||| |||| || |||||| ||| Sbjct 936610 TTTGCCGAGCGTCTCATTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTT 936551 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 || |||| || | |||| || | || | |||||||||| || || || ||||| Sbjct 936550 GCGTCCATTTTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGACTCACATTCTCGAACGA 936492 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACACTC 46324 |||||| ||||| |||||||| || || || |||||||| |||| ||| || || | Sbjct 936491 GCTGATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTTCTCCT----CAGCC 936436 Query 46325 GCGTGCACGACAAGCTTGCGCCC-GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 | | | | | || | ||| ||||| | | || |||||||||| || Sbjct 936435 ACCTCCGCCGC-CGCCCCCACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCAAG 936377 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443 |||||| ||||||| |||| | || || |||| | ||| | ||||||||||| | Sbjct 936376 ATTGAGCAGGAGTTCCTTACCGAGGCCCTCCCCGTCTCGCTGATTGGCATGAACGCCAAC 936317 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 |||||| | ||||| |||||||| || ||||| |||||||| Sbjct 936316 CTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTCGT 936273 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| ||||||||||| || Sbjct 996177 CCACCACGCAGACGGAGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996236 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | |||||||||||| |||||| Sbjct 996237 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGG 996296 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || || | || |||| Sbjct 996297 ATACCCTCCTTGTCCTGAATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGACC 996356 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| | ||| || ||||| |||||||| Sbjct 996357 TCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| ||||||||||| || | || || ||||| ||||||||||| Sbjct 995979 GTCGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTACGACCATCCTCGAGCTGCTTGCCG 996038 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 996039 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTC 996098 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| ||||| | || | || | || || ||||| || || Sbjct 996099 ACGTTGTCGATCGTGTCGGACGACTCAACCTCAAGAGTGATCGTCTTGCCGGTAAGCGTC 996158 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 996159 TTGACGAAAATCTGCAT 996175 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| ||| || || || ||||| ||||||||||| Sbjct 996663 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCA 996722 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||||||||||| || || || || || ||||| ||| ||| |||| Sbjct 996723 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 996782 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAG 131213 | | || | || || | ||||| | |||| ||| | ||| || ||||| || Sbjct 996783 ACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAG 996838 >seq1 Length=6933627 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||||| Sbjct 1728681 GGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGAT 1728622 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 || || ||||| ||| ||| ||||| | || | || || | ||||||| || Sbjct 1728621 GCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTC 1728562 Query 131190 GACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 | ||| | ||| || ||||| || || || || Sbjct 1728561 AAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1728529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012676096640