Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq8 123 2e-23 seq2 100 2e-16 >seq8 Length=1019311 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| ||||| || ||| | || || || || ||| | | Sbjct 996403 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACGATTACGCTCGAGGTCGAATCGTCG 996344 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| |||||||||||||| || || || || Sbjct 996343 GACACGATCGACAACGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 996284 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||||||||| ||| | |||||| |||||| |||| || |||||| Sbjct 996283 CAGCGTCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCTCGGACTACAAC 996224 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | || | ||| | || |||| || ||| Sbjct 996223 ATTCAGAAGGAGTCGACTCTCCACCTTGTTCTCCGTCTGCGTGGTGGT 996176 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || ||| |||||||||| || || | || Sbjct 996175 ATGCAGATTTTCGTCAAGACGCTTACCGGCAAGACGATCACTCTTGAGGTTGAGTCGTCC 996116 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||||||||| || || || Sbjct 996115 GACACGATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 996056 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| || || |||| || |||||| Sbjct 996055 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACACTCTCGGACTACAAC 995996 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 995995 ATTCAGAAGGAGTCGAC 995979 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || | Sbjct 996631 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 996572 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| ||||| || || || Sbjct 996571 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 996512 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| |||||| | ||||| |||||| Sbjct 996511 CAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAAC 996452 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 996451 ATCCAGAAGGAGTCCAC 996435 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || | | || ||| | ||| | |||| Sbjct 996835 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAACGTCAAGTCG 996776 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || || || || || || ||||| Sbjct 996775 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTCATCTTCGCTGGCAAG 996716 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||| || | ||||| |||||||| || || || ||||| Sbjct 996715 CAGCTCGAGGATGGCCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCCAC 996663 >seq2 Length=6146035 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || |||| ||||| || || || | Sbjct 1714783 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 1714724 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||||||||| || || ||||| || Sbjct 1714723 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 1714664 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||||| |||| || |||||| Sbjct 1714663 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 1714604 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 1714603 ATCCAGAAGGAGTCGACC 1714586 Score = 89.7 bits (98), Expect = 4e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 117060 CGCATGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATA 117119 ||| |||| || |||||| ||| |||||||| |||||||| || ||||| ||||| Sbjct 1862522 CGCCTGATTGCGTTCGCCTGTGTTGAAGGCATCTTCTTTTCCGGATCGTTTGCGGCCATT 1862581 Query 117120 TTTTTTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCG 117179 || | | |||| || ||||||| || || || || |||||| | || ||| Sbjct 1862582 TTCTGGCTAAAGAAGCGCGGACTAATGCGCGGGCTCACATTCTCCAACGAGCTCATCTCG 1862641 Query 117180 CGTGACGAAGGTTTACACACCGATTTTGCGTGCATGTACTAC 117221 |||||||| || | |||||||| ||||||||| || |||| Sbjct 1862642 CGTGACGAGGGCATGCACACCGACTTTGCGTGCCTGCTCTAC 1862683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727892575865