Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7 158 2e-33 seq8 120 6e-22 seq2 111 3e-19 seq1 102 2e-16 >seq7 Length=1409272 Score = 158 bits (174), Expect = 2e-33 Identities = 359/540 (66%), Gaps = 0/540 (0%) Strand=Plus/Plus Query 218505 CATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGA 218564 ||| ||| ||| ||||| || |||||||||||||||| ||||| | || Sbjct 1314381 CATTCCCCTCCAGGACTTTGTCAACAAGGAGCTCATTCTCTTCTCCATGGCCGACAACAT 1314440 Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 ||||| || ||| || | || ||||||||||| || || ||| || ||||||| Sbjct 1314441 TCGTTCCATCCCCTCGGTCGCAGACGGCCTCAAGCCCGGTCAACGCAAGGTCATCTTTGC 1314500 Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684 | |||||||| ||||| | ||||| |||||||| ||| | ||||||||| || Sbjct 1314501 CTGCTTCAAGCGTAACCTCAAGAAGGAAATCAAGGTCGCCCAGCTCGGTGGTTATGTTTC 1314560 Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGC 218744 || | | | ||||| |||||||| |||||| | | ||||| || | || Sbjct 1314561 GGAGAACACGGCGTACCACCACGGTGAAGTCAGTCTGACGTCGACAATTGTTGGACTTGC 1314620 Query 218745 ACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTC 218804 ||| ||| ||||||||| |||||||| ||| |||| |||||||||||||| ||| | Sbjct 1314621 CCAGAACTTTGTGGGCAGCAACAACATTAACCTGCTCGAGCCCAACGGTCAGTTCGGTAC 1314680 Query 218805 TCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCC 218864 ||| | ||||||||||| || || | ||||| || || || | | | Sbjct 1314681 TCGCATGCAAGGTGGAAAGGACGCAGCCAGCGCTCGTTATATTTTCACCAACGTTCCTCG 1314740 Query 218865 CGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGA 218924 | |||| ||| | ||| | | | | || || | | || || || || | || || Sbjct 1314741 CATGACTCGCACCATCTTCCACCCGTCGGACGACGCCATTCTCAACTACCTCGTTGAAGA 1314800 Query 218925 TGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGG 218984 || ||||||||| |||| || | || | | || | ||||||| || || Sbjct 1314801 CGGCCAGAAGATTGAGCCAGAGTACTACCTCCCCACCGTCCCCATGGTGCTCGTCAACGG 1314860 Query 218985 TGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACAT 219044 |||| |||||||||| || || | ||||| ||||| ||||| ||||||||||| Sbjct 1314861 TGCCGATGGTATCGGAACTGGTTGGAGTACCTCAATTCCCAACTACAACCCCAAGGACAT 1314920 >seq8 Length=1019311 Score = 120 bits (132), Expect = 6e-22 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | ||||||||||||||||||||| ||| Sbjct 936183 TCGAAGAAGTTTGCCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGTG 936242 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || | |||| |||| | ||| || || |||| | ||||| || |||||||| | Sbjct 936243 GCGTGGTACATCTTGTCGTTGCCCAGGGCGACGAGCAGACGGTCGGCGACAAACTCAATG 936302 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA 251716 ||||| | ||| || | | |||||||||||||| Sbjct 936303 TACTGGCACATGAGGTTGGCGTTCATGCCAATCA 936336 >seq2 Length=6146035 Score = 111 bits (122), Expect = 3e-19 Identities = 183/261 (70%), Gaps = 11/261 (4%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || ||||||||||||||||||||||| | ||| | |||||||| || | | ||| Sbjct 943132 TCGCTTTCGGGTGGTTGGAAGATGAAGCTCGAGCTCGCCCGCGCCATGCTTATCGGCGCC 943073 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || || || |||||||| |||||||| | ||| | ||| || ||||| Sbjct 943072 GACATTCTCCTCCTCGATGAGCCTACCAACCATCTCGACGTTCAGACCGTCGCTTGGCTT 943013 Query 279822 GTGTCCTACCT----AACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTC 279877 | | |||||| |||| || | ||| | | ||| || ||||| |||||||| Sbjct 943012 GAGAACTACCTCGTCAACC--TCCCCACCATG--ACCTGCCTGATCGTCTCGCACGACTC 942957 Query 279878 TGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTC 279937 ||||||||| || ||||| | | ||| |||||||| ||||| || |||||| | Sbjct 942956 TGGCTTCCTCGACAATGTGTGTACCGACATTATTCACTACGAGCAGAA---GAAGCTTGC 942900 Query 279938 CAAGCACATCGGCAACCTGTC 279958 | | ||| |||||||| || Sbjct 942899 CTACTACAAGGGCAACCTTTC 942879 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 |||||| | || ||||| ||||| || ||||| ||||| ||||| |||| ||||||||| Sbjct 942664 GGTGTCGTCGGCCCCAACGGTGCCGGCAAGTCGACCCTCATCAAGCTCCTTACTGGCGAG 942605 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 || | ||||| |||| ||||| || | || | | |||||| || Sbjct 942604 ACTGTTCCTCAGGAGGGTACCGTCCACAAGCACCCTGCTCTCCGTGTCGGTTACGTTGCC 942545 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| |||||||||||| | | ||||| |||| |||| | ||| ||||| ||| Sbjct 942544 CAGCACGCGTTCCACCACATCAACCAGCACCTCGACAAGACTGCCGTCCAGTACATCCAG 942485 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 942484 TGGCGTTA 942477 >seq1 Length=6933627 Score = 102 bits (112), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| ||||| |||| |||| || |||||||| || || Sbjct 4472101 GGTCCCAACGGTTCCGGAAAGTCGACCCTCGTCAAGCTCCTTACCGGCGAGACTGAGCCC 4472160 Query 280239 ACTGAGGGGT---CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| |||| |||||||| |||||| | || | |||||| || |||||| Sbjct 4472161 AACAAGGGCGGAACCGTCTGGAAGCACCCCAACCTCGTCATTGGTTACGTTGCCCAGCAC 4472220 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || ||||||||||| || | ||||| ||| ||||||| | | ||||| | ||||| Sbjct 4472221 GCCTTCCACCACATTGACCAGCACCTTGACTCGACTCCTCTCGAGTACATGCTTTGGCGT 4472280 Query 280356 TA 280357 || Sbjct 4472281 TA 4472282 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || || || || |||||||||||||||||||| ||||| | || |||||||| | ||| Sbjct 4471618 GGCTCGCTCTCCGGTGGTTGGAAGATGAAGCTCGCCCTTGCGCGTGCCATTCTCTTCCGT 4471677 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| | || || || || ||||| ||||||||| | ||| | |||||| ||||| Sbjct 4471678 GCCGACATTCTCCTCCTCGACGAGCCTACCAACCACCTCGACGTCGTCAACGTCACCTGG 4471737 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || | |||||| ||| || | | |||| |||| || || |||||||| Sbjct 4471738 CTCATCGACTACCTCACCTCGCTCACCACCTGCACTTCGATCATGGTTTCGCACGACTCG 4471797 Query 279879 GGCTTCCT 279886 | |||||| Sbjct 4471798 GACTTCCT 4471805 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 280712 CATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCA 280771 ||| |||||||| || || |||||||||||||| | ||| | || || || |||| Sbjct 4472652 CATGCGCGGTCTCTCGGGTGGCCAGAAGGTCAAGGTCGTCCTTGGTGCCGCCACCTGGCG 4472711 Query 280772 ACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAG 280823 | ||| ||||| ||| |||||||||||| |||||||| || ||||||||| Sbjct 4472712 CCGCCCCCACGTCATCTGTCTCGACGAGCCCACCAACTACCTCGACCGCGAG 4472763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836523447661