Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq8 132 1e-25 seq2 107 5e-18 seq7 86.0 1e-11 >seq8 Length=1019311 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| ||||| |||| |||| || || ||||| || ||||||| Sbjct 996405 CCACCGCGGAGACGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAA 996464 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || |||||| Sbjct 996465 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTG---GTCTGGG 996521 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || |||| || || || || || | || || || Sbjct 996522 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCG 996581 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 996582 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 Score = 123 bits (136), Expect = 6e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | ||||||||| || || || | || || || || ||| Sbjct 996213 TCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 996272 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 || |||||||| || | ||||| || || || ||||| || || ||| || ||||| Sbjct 996273 ATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTT-GCTCTTAACGTT 996331 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || |||||| || |||||||| |||||||| ||||||| ||||||||| Sbjct 996332 GTCGATCGTGTCCGACGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGAC 996391 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 996392 GAAGATCTGCAT 996403 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || |||| ||| ||||| || | ||| || || || || || ||||| Sbjct 995946 TGGCCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCC 996005 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| || || || || || | || || || ||||| ||||| ||||| || | Sbjct 996006 GAGAGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGA 996065 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || |||||||| || | |||||||| || || | ||| ||| || Sbjct 996066 GGAATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCA 996125 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 996126 ACCTCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 >seq2 Length=6146035 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || ||||| | | Sbjct 1714557 CCACCACGAAGGCGTAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 1714616 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 1714617 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 1714676 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | || || || || Sbjct 1714677 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 1714736 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 1714737 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCAT 1714783 >seq7 Length=1409272 Score = 86.0 bits (94), Expect = 1e-11 Identities = 413/648 (64%), Gaps = 14/648 (2%) Strand=Plus/Minus Query 325121 ACGATGTCTTTAGGGTTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCGATACCACTC 325180 || ||||| || |||||||| ||||||| || ||| || |||||||||||| Sbjct 1314923 ACAATGTCCTTGGGGTTGTAGTTGGGAATTGAGGTACTCCAACCAGTTCCGATACCATCG 1314864 Query 325181 GATCCATTCACCAGGATACTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTATCG 325240 | || || || || | | || | || | || |||||||| || ||||| | | Sbjct 1314863 GCACCGTTGACGAGCACCATGGGGACGGTGGGGAGGTAGTACTCTGGCTCAATCTTCTGG 1314804 Query 325241 CCGTCGTCGTACATATATTTCAGAAGATTGTCGTCCGTATCGACGAAAACCTGTCGAGTC 325300 ||||| || | || || |||| |||||||| | ||| | |||||| Sbjct 1314803 CCGTCTTCAACGAGGTAGTTGAGAATGGCGTCGTCCGACGGGTGGAAGATGGTGCGAGTC 1314744 Query 325301 -TGAGGGTTCAGTTTCatatatatatatCGTGCACTCGCGTGATCCTTACCACCCTGCAA 325359 || | | ||| | | ||||| || || || || ||||| ||||| |||| Sbjct 1314743 ATGCGAGGAACGTTGGTGAAA-ATATAACGAGCGCTGGCTGCGTCCTTTCCACCTTGCAT 1314685 Query 325360 TCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATC 325419 | | ||||||||| || | ||| | | ||| ||||| ||||| || ||| | | Sbjct 1314684 GCGAGTACCGAACTGACCGTTGGGCTCGAGCAGGTTAATGTTGTTGCTGCCCACAAAGTT 1314625 Query 325420 CTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATG 325479 ||| ||||| || || ||| |||| |||| || ||||| || || | | Sbjct 1314624 CTGGGCAAGTCCAACAATTGTCGACGTCAGACTGACTTCACCGTGGTGGTACGCCGTGTT 1314565 Query 325480 CTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAA 325539 ||| | ||| ||||| | || ||| || ||||| | || || | | || |||||||| Sbjct 1314564 CTCCGAAACATAACCACCGAGCTGGGCGACCTTGATTTCCTTCTTGAGGTTACGCTTGAA 1314505 Query 325540 AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCT 325599 | | | || || || |||||| || |||| || || ||||||| || ||| Sbjct 1314504 GCAGGCAAAGATGACCTTGCGTTGACCGGGCTTGAGGCCGTCTGCGACCGAGGGGATGGA 1314445 Query 325600 TCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGG 325659 || ||| | ||||| | ||| || ||||||| || ||||| | | ||| Sbjct 1314444 ACGAATGTTGTCGGCCATGGAGAAGAGAATGAGCTCCTTGTTGACAAAGTCCTGGAGGGG 1314385 Query 325660 AACCTCGGGCTTCTTGT---GGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACT 325715 || || ||| ||| |||| || | | | || || | | | ||||| | ||||| Sbjct 1314384 AAT---GGTCTTAATGTCGTGGTCGAGGTAAGTACCAGGCTTGAACTGCCGA-AGCCACT 1314329 Query 325716 CCTTGCGATCCTCGGC--TCGTGACTTGTTGAAAGAACGGTCAATGAG 325761 ||||||| || ||||| || | ||||||||| | ||||||||| Sbjct 1314328 CCTTGCGGTCGTCGGCCTTCTT--CTTGTTGAACGCCATGTCAATGAG 1314283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654082599238