Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8 107 4e-18 seq7 96.9 8e-15 seq2 93.3 9e-14 >seq8 Length=1019311 Score = 107 bits (118), Expect = 4e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 243487 GAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGAC 243546 || ||| |||| | ||||||| || || || | | || |||| ||| || ||| Sbjct 936412 GACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATTGAGCAGGAGTTCCTTACCGAG 936353 Query 243547 GCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTC 243606 || | || | ||| |||||||||||| | | |||||| | |||||||| || || Sbjct 936352 GCCCTCCCCGTCTCGCTGATTGGCATGAACGCCAACCTCATGTGCCAGTACATTGAGTTT 936293 Query 243607 GTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCC 243666 || |||||||| | || |||| || || | || || ||||| || ||| |||||| Sbjct 936292 GTCGCCGACCGTCTGCTCGTCGCCCTGGGCAACGACAAGATGTACCACGCCACCAACCCC 936233 Query 243667 TTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 || | ||| |||||| | || ||||| || || || | ||||||||||| |||||| Sbjct 936232 TTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGGCAAACTTCTTCGAGTCGCGTGT 936174 >seq7 Length=1409272 Score = 96.9 bits (106), Expect = 8e-15 Identities = 298/455 (65%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 297434 TTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAAC 297493 || ||||||||||| || || || || ||||| ||||| |||| | | ||||||| Sbjct 1314731 TTGGTGAAAATATAACGAGCGCTGGCTGCGTCCTTTCCACCTTGCATGCGAGTACCGAAC 1314672 Query 297494 TGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTC 297553 || || | ||| | | ||| ||||| ||||| || ||| | | ||| ||||| Sbjct 1314671 TGACCGTTGGGCTCGAGCAGGTTAATGTTGTTGCTGCCCACAAAGTTCTGGGCAAGTCCA 1314612 Query 297554 ACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 || || ||| |||| |||| || ||||| || || | | ||| | ||| ||| Sbjct 1314611 ACAATTGTCGACGTCAGACTGACTTCACCGTGGTGGTACGCCGTGTTCTCCGAAACATAA 1314552 Query 297614 CCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATC 297673 || | || ||| || ||||| | || || | | || |||||||| | | | || Sbjct 1314551 CCACCGAGCTGGGCGACCTTGATTTCCTTCTTGAGGTTACGCTTGAAGCAGGCAAAGATG 1314492 Query 297674 ACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCG 297733 || || |||||| || |||| || || ||||||| || ||| || ||| Sbjct 1314491 ACCTTGCGTTGACCGGGCTTGAGGCCGTCTGCGACCGAGGGGATGGAACGAATGTTGTCG 1314432 Query 297734 TACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGCT-- 297791 | ||||| | ||| || ||||||| || ||||| | | ||||| || || Sbjct 1314431 GCCATGGAGAAGAGAATGAGCTCCTTGTTGACAAAGTCCTGGAGGGGAA---TGGTCTTA 1314375 Query 297792 -TCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTC 297849 | | |||||| || | | | || || | | | ||||| | |||||||||||| || || Sbjct 1314374 ATGTCGTGGTCGAGGTAAGTACCAGGCTTGAACTGCCG-AAGCCACTCCTTGCGGTCGTC 1314316 Query 297850 GGC--TCGTGACTTGTTGAAAGAACGGTCAATGAG 297882 ||| || | ||||||||| | ||||||||| Sbjct 1314315 GGCCTTCTT--CTTGTTGAACGCCATGTCAATGAG 1314283 >seq2 Length=6146035 Score = 93.3 bits (102), Expect = 9e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 |||| | |||||||| |||||||| |||||||| | || |||| || || || || || Sbjct 1862848 CATGTGCCAGTACATGGAATTCGTCGCCGACCGGCTGGTCGTCGCTCTCGGCTACGACAA 1862907 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 | ||| |||| || ||||||| || ||||||||||| ||||| ||||| || | Sbjct 1862908 GATCTACCACTCTGCAAATCCCTTTGACTGGATGGAGCTCATCTCGCTGCAAGGCAAGGC 1862967 Query 243705 TAACTTCTTCGAAAAGCGTGTCAG 243728 ||||| ||||| ||| ||||| Sbjct 1862968 CAACTTTTTCGAGTCGCGCGTCAG 1862991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879703256350