Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 seq8 107 2e-18 seq1 91.5 2e-13 >seq2 Length=6146035 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 1714592 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1714651 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 1714652 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1714710 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || || || || | |||||||| |||||||| || ||||| | Sbjct 1714711 TGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 1714770 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 1714771 CGAAAATCTGCAT 1714783 >seq8 Length=1019311 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 996440 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAA 996499 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | || | || |||||||||| ||| | || | |||| Sbjct 996500 GATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGACAT 996558 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || |||| |||||||| |||||||| || ||||| | Sbjct 996559 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 996618 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 996619 CGAAGATCTGCAT 996631 Score = 100 bits (110), Expect = 3e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | |||||| || | || || |||||||| |||||||| Sbjct 996668 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 996727 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 996728 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 996786 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 | | | ||||| || || || |||| |||||||| ||||| || || Sbjct 996787 TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAG 996838 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | || || || | || || |||||||| || ||||| Sbjct 995984 CTCCTTCTGAATGTTGTAGTCCGAGAGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAA 996043 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 996044 AATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTCA-CGT 996102 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||||| ||| || || || | ||||| || ||||| || |||||||| | Sbjct 996103 TGTCGATCGTGTCGGACGACTCAACCTCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGA 996162 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 996163 CGAAAATCTGCAT 996175 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | || || || | || || |||||||| || || || Sbjct 996212 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 996271 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| ||| | || | | | ||| Sbjct 996272 GATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC-TGAATCTTGCTCTTAACGT 996330 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| |||||| || |||| ||| || || ||||| || | ||||| | Sbjct 996331 TGTCGATCGTGTCCGACGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGA 996390 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 996391 CGAAGATCTGCAT 996403 >seq1 Length=6933627 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090 |||| || | || || || |||| || |||||||| |||||||| ||||| ||||||| Sbjct 1728694 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 1728635 Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 42149 |||| | || | || |||||||||| ||| || |||| ||| | | | |||||| Sbjct 1728634 GGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTGTCGATCGTGTCC 1728576 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 ||| || || || | |||||||| ||||| || || ||||| || Sbjct 1728575 GACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1728529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212657406640