Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq8 113 5e-20 seq2 104 2e-17 >seq8 Length=1019311 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | || ||| || || || | |||||| || || ||||||||||| || | | Sbjct 995949 CCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996008 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || || |||||||||||||| |||| || ||||||||||| |||||| Sbjct 996009 AGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 996068 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || | || || Sbjct 996069 ATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAACC 996128 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||||||||| | || || |||||||| ||||| Sbjct 996129 TCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||||| || || ||||||||||| || | Sbjct 996176 ACCACCACGCAGACGGAGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGA 996235 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || ||||||||||||||| | || || ||||||||||| ||||| Sbjct 996236 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGG 996295 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || || || || || || || || ||| || || | || | ||| || || Sbjct 996296 GATACCCTCCTTGTCCTGAATCTTGCTCTTAACGTTGTCGATCGTGT--CCGACGATTCG 996353 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | ||||||||||||||||| || ||||| || ||||| Sbjct 996354 ACCTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || |||| ||| || || || || |||||||| || | Sbjct 996404 ACCACCGCGGAGACGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGA 996463 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || ||||||||||| || | ||||| ||||||||||| || || Sbjct 996464 AAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGG 996523 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || || || || Sbjct 996524 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGAC 996583 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 996584 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 >seq2 Length=6146035 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| |||| || |||||||||||| Sbjct 1714587 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1714646 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||||||||| || || || || || || || || || ||| Sbjct 1714647 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1714706 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || || || | || | ||||||||| || | || Sbjct 1714707 ACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTC 1714766 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 1714767 TTGACGAAAATCTGCAT 1714783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644668843240