Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq8 134 3e-26 seq2 127 5e-24 >seq8 Length=1019311 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||||||||||||||| || | ||||||||| | | || | ||||| Sbjct 996192 AGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCC 996251 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| ||||| |||||||||||||| ||| || || || ||| Sbjct 996252 TCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 996311 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | ||| || || | ||| |||||| Sbjct 996312 TGAATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGACCTCGAGCGTAATCGTC 996371 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || || || || || Sbjct 996372 TTGCCGGTCAAAGTCTTGACGAAGATCTG 996400 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || || |||||||| ||||||||||| || | ||||||||| | | || Sbjct 995955 CGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTA 996014 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| || || ||||||||||| ||| ||| || Sbjct 996015 CGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCC 996074 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||||| |||| ||||| | | || || || | Sbjct 996075 TCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAACCTCAAGA 996134 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || || || ||||| || Sbjct 996135 GTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTG 996172 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||| | || ||| | ||||| Sbjct 996648 AGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCC 996707 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| ||||||||||| || ||| || || ||| Sbjct 996708 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 996767 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 996768 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTC 996827 Query 199598 TTACCCGTGAG 199608 || || ||||| Sbjct 996828 TTGCCGGTGAG 996838 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||| | | || | || || Sbjct 996420 AGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCC 996479 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| ||||||||||| || ||| || || ||| Sbjct 996480 TCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 996539 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 996540 TGAATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 996599 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 996600 TTGCCCGTGAGGGTCTTGACGAAGATCTG 996628 >seq2 Length=6146035 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 1714563 CGAAGGCGTAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 1714622 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| |||||||||||||| ||||||||||| || || || Sbjct 1714623 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCC 1714682 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| ||||| | | || || || | Sbjct 1714683 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGG 1714742 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || || || ||||| || Sbjct 1714743 GTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTG 1714780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921282796407