Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq8 158 3e-33 seq2 120 7e-22 seq1 98.7 2e-15 >seq8 Length=1019311 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| ||||| ||||| || ||||| ||||| || | || || | ||||| || Sbjct 996194 AACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCCTC 996253 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || |||||||| || || ||||| ||||| || || || ||||| || Sbjct 996254 GAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTG 996313 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || || |||||||| ||| || || || |||| |||||| Sbjct 996314 AATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGACCTCGAGCGTAATCGTCTT 996373 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | ||||| Sbjct 996374 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| |||||||| || || || ||||| |||| ||| || | || || ||| Sbjct 996423 ACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCG 996482 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || |||||||| |||||||| || ||||| ||| Sbjct 996483 AGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 996542 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || ||||||||||| || || || ||||| | ||||| Sbjct 996543 ATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 996602 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 996603 CCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| |||||||| || || || ||||| |||| ||||| | ||||| ||| Sbjct 996651 ACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCCTCG 996710 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || |||||||| || ||||| || Sbjct 996711 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 996770 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||||||| || || || ||||| | ||||| Sbjct 996771 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTG 996830 Query 195112 CCTGT 195116 || || Sbjct 996831 CCGGT 996835 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| | ||| ||||| || || ||||| || ||||| ||||| || | || || | Sbjct 995958 AGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTACGA 996017 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||||||||| || ||||| || || || || ||||| |||||||| || || Sbjct 996018 CCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCC 996077 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| ||||| || || ||||| || || || ||||| || Sbjct 996078 TTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAACCTCAAGAGTG 996137 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | || || ||||| | ||||| Sbjct 996138 ATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 >seq2 Length=6146035 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | || || | || || ||| Sbjct 1714575 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 1714634 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 1714635 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1714694 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| || || |||||||| | ||||| Sbjct 1714695 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTG 1714754 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1714755 CCCGTAAGGGTCTTGACGAAAATCTGCAT 1714783 >seq1 Length=6933627 Score = 98.7 bits (108), Expect = 2e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||| || | || || ||||||||||| || |||||||| || || || | Sbjct 1728694 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 1728635 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| || || ||||| || ||||| || || || ||||||||| || || ||||||| Sbjct 1728634 GGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCG 1728575 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || |||||||| | ||||| || || Sbjct 1728574 ACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 1728541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481301480107